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Prof Peter Golyshin

Professor in Biology (Biotechnology)

p.golyshin@bangor.ac.uk

+44 1248 383629

0000-0002-5433-0350

Prof Peter Golyshin

View Prof Peter Golyshin’s profile on the Bangor Research Portal

Overview

Prof Peter Golyshin is interested in the environmental genomics of microorganisms. He performed the first omics-based studies in marine obligate hydrocarbonoclastic bacteria that play a key role in marine oil degradation worldwide. He pioneered activity-based metagenomic enzyme discovery in cow rumen, earthworm gut and deep-sea environments.  His other significant achievements include the determination of the chaperonin-based cold adaptation in E. coli and Oleispira. His lab has isolated and described >10 microbial taxa at the level of the genus and above and performed culture-independent analysis of  deeply branching microbial phyla from extreme habitats. His current activities focus on mining (meta)genomes for enzymes of industrial relevance from extremophiles and biodegradation of organic pollutants (including plastics) in the environment.

Profile in Google Scholar: http://scholar.google.co.uk/citations?sortby=pubdate&hl=en&user=zc7Da-AAAAAJ&view_op=list_works

Profile in ORCID : http://orcid.org/0000-0002-5433-0350

 

Current projects

  • Centre for Environmental Biotechnology (CEB) ERDF/Welsh European Funding Organisaion-Bangor University co-funded, project ID:81280,  Director, total grant £8.6 M. http://environmental-biotechnology.bangor.ac.uk/index.php.en
  • EU Horizon 2020, Grant Nr 101000327 FuturEnzyme: Enzymes for more environment-friendly consumer products (PI) 2021-2025, EUR 549,000. http://www.futurenzyme.eu/
  • NERC (Natural Environment Research Council UK) Grant Nr NE/S004548/1. Microbial hitch-hikers of marine plastics: the survival, persistence & ecology of microbial communities in the Plastisphere (PI ) 2019-2023, £599,000

Past projects

  • EU FP7. KBBE-226977 Marine Metagenomics for new Biotechnological Applications (MAMBA) 2009-2013. Coordinator, total 2.9 Mio EUR http://mamba.bangor.ac.uk Associated with a Partner Project BEEM (CAD 10M) http://www.beem.utoronto.ca/
  • EU FP7 KBBE-245226 Molecular Approaches and MetaGenomic Investigations for optimizing Clean-up of PAH-contaminated sites (MAGIC PAH) 2010-2014. €305.000 http://www.magicpah.org/
  • EU FP7 KBBE-266473 Unravelling and exploiting Mediterranean Sea microbial diversity and ecology for xenobiotics’ and pollutants’ clean up (ULIXES) 2011-2014. €300.000 http://www.ulixes.unimi.it/
  • Royal Society UK (2013 Russia (RFBR) cost share) Mining novel enzymes from new thermophilic microorganisms from subsurface,Sep 1, 2013-Aug 31, 2015, £12.000
  • Royal Society (RS-DFID Africa Network Grants) Assessment of water quality indices of some recreational surface waters in the Eastern Cape Province of South Africa as a tool for capacity development in the impoverished Province,  Sep 1, 2013-Aug 31, 2014, £ 25.000
  • EU FP7 (OCEAN.2011-2 287589) Marine Microorganisms: Biodiversity, Bioinformatics and Biotechnology (MICROB3) 2012-2016. €300.000 http://microb3.eu/
  • EU FP7 Integrated Biotechnological Solutions for Combating Marine Oil Spills (Kill-Spill) 2013-2016, €312.000 http://www.killspill.eu/
  • NERC (joint with Davey Jones, SENR), Characterisation of the nature, origins and ecological significance of dissolved organic matter in freshwater ecosystems, Apr 1, 2014-May 31, 2017, £440.000 http://www.nerc-domaine.uk/
  • SynbiCITE: Innovation and Knowledge Centre (IKC) in Synthetic Biology, co-funded by EPSRC (EP/L011573/1), 2013-2018 http://www.synbicite.com/ 
  • Innovate UK-BBSRC Grant  No. 101911 Biotechnology for Antiweeds (BaW) (PG with Dr Slava Tverezovskiy  (BioComposites) 1.09.2014-31.08.2017, £498.000.
  • ERA-Net IB2-BBSRC [14-ERA IB] Grant Nr BB/M029085/1. A metagenomic collection of novel and highly efficient biocatalysts for industrial biotechnology (MetaCat) PI, 1.03.2015-28.02.2018, £340.000
  • EU Horizon 2020 (Contract Nr 634486) Industrial applications of marine enzymes: Innovative screening and expression platforms to discover and use the functional protein diversity from the sea (INMARE) Co-ordinator, 01.04.2015-31.03.2019, €6,000,000 http://inmare.bangor.ac.uk/index.php.en

Offices held

Committees:

  • SBS Board of Studies
  • SBS Research Committee

Groups:

  • SBS Academic Staff
  • SBS Teaching Staff

Additional Contact Information

Role

Chair in Environmental Genomics,

Director, the Centre for Environmental Biotechnology (CEB)

http://environmental-biotechnology.bangor.ac.uk/index.php.en

 

Email

p.golyshin@bangor.ac.uk

Location

313.2, 2nd floor Thoday bldg

Phone

3629

Qualifications

  • PhD
    Lomonosov Moscow State University, 1987–1991
  • MSc: Diploma with Distinction
    Lomonosov Moscow State University, 1982–1987

Postgraduate Project Opportunities

At the Centre for Environmental Biotechnology we offer a range of postgraduate projects on topics exemplified below

  • discovery of novel enzymes of industrial relevance from extremophilic microorganisms and their communities;
  • microbiology of petroleum degradation in marine environments: cultivation and OMICS studies);
  • applications of marine oil-degrading bacteria (enzymes, surfactants, biopolymers, osmolytes);
  • culture-independent (metagenomic) analysis of taxonomic composition and functional potential of microbial communities;
  • investigation of the role of marine microorganisms and their enzymes in the fate of synthetic polyester plastics;
  • application of proteomics technologies to enzyme discovery (general principles, sample preparation and enzymatic digestion of proteins, LC-MS analysis of peptide mixtures and data analysis;
  • application of metabolomics technologies to enzyme discovery (general principles, sample preparation, targeted and discovery mode LC-MS analysis of complex metabolite mixtures and data analysis;
  • application of lipidomics technologies to study microbial communities (general principles, sample preparation, lipid extraction, targeted and discovery mode LC-MS analysis of complex lipid mixtures and data analysis.

To apply, please follow the guidance:

 http://environmental-biotechnology.bangor.ac.uk/postgrad-projects.php.en

Publications

2023

  • PublishedEnzyme adaptation to habitat thermal legacy shapes the thermal plasticity of marine microbiomes
    Marasco, R., Fusi, M., Coscolín, C., Borozzi, A., Almendral, D., Bargiela, R., Gohlke neé Nutschel, C., Dittrich, J., Gohlke, H., Matesanz, R., Sanchez-Carrillo, S., Mapelli, F., Chernikova, T., Golyshin, P., Ferrer, M. & Daffonchio, D., 24 Feb 2023, In: Nature Communications. 14, 1, 1045.
    Research output: Contribution to journal › Article › peer-review
  • PublishedLutispora saccharofermentans sp. nov., a mesophilic, non-spore-forming bacterium isolated from a lab-scale methanogenic landfill bioreactor digesting anaerobic sludge, and emendation of the genus Lutispora to include species which are non-spore-forming and mesophilic
    El Houari, A., Carpenter, M., Chaplin, D., Golyshin, P. & McDonald, J. E., Feb 2023, In: International Journal of Systematic Evolutionary Microbiology. 73, 1, 005683.
    Research output: Contribution to journal › Article › peer-review
  • PublishedMicrobiome enrichment from contaminated marine sediments unveils novel bacterial strains for petroleum hydrocarbon and heavy metal bioremediation
    Dell'Anno, F., van Zyl, L. J., Trindade, M., Buschi, E., Cannavacciulo, A., Pepi, M., Sansone, C., Brunet, C., Ianora, A., de Pascale, D., Golyshin, P., Dell'Anno, A. & Rastelli, E., 15 Jan 2023, In: Environmental Pollution. 317, 120772.
    Research output: Contribution to journal › Article › peer-review
  • PublishedThe Mobility of the Cap Domain Is Essential for the Substrate Promiscuity of a Family IV Esterase from Sorghum Rhizosphere Microbiome
    Distaso, M., Cea-Rama, I., Coscolín, C., Chernikova, T., Tran, H., Ferrer, M., Sanz-Aparico, J. & Golyshin, P., 31 Jan 2023, In: Applied and Environmental Microbiology. 89, 1, e0180722.
    Research output: Contribution to journal › Article › peer-review
  • PublishedThermophilic Carboxylesterases from Hydrothermal Vents of the Volcanic Island of Ischia Active on Synthetic and Biobased Polymers and Mycotoxins
    Distaso, M., Chernikova, T., Bargiela, R., Coscolín, C., Stogios, P. J., Gonzalez-Alfonso, J. L., Lemak, S., Khusnutdinova, A., Plou, F. J., Evdokimova, E., Savchenko, A., Lunev, E., Yakimov, M. M., Golyshina, O., Ferrer, M., Yakunin, A. & Golyshin, P., 28 Feb 2023, In: Applied and Environmental Microbiology. 89, 2, p. e0170422 20 p.
    Research output: Contribution to journal › Article › peer-review

2022

  • PublishedA mechanistic understanding of polyethylene biodegradation by the marine bacterium Alcanivorax
    Zadjelovic, V., Erni-Cassola, G., Obrador-Viel, T., Lester, D., Eley, Y., Gibson, M. I., Dorador, C., Golyshin, P., Black, S., Wellington, E. M. H. & Christie-Oleza, J., 15 Aug 2022, In: Journal of Hazardous Materials. 436
    Research output: Contribution to journal › Article › peer-review
  • PublishedAnaerobic carboxydotrophy in sulfur-respiring haloarchaea from hypersaline lakes
    Sorokin, D. Y., Merkel, A. Y., Messina, E., Taugi, C., Pabst, M., Golyshin, P. & Yakimov, M. M., Jun 2022, In: The ISME Journal. 16, 6, p. 1534-1546 13 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedCalm and Frenzy: marine obligate hydrocarbonoclastic bacteria sustain ocean wellness
    Yakimov, M. M., Bargiela, R. & Golyshin, P., 2 Feb 2022, In: Current Opinion in Biotechnology. 73, p. 337-345
    Research output: Contribution to journal › Article › peer-review
  • PublishedField response of N2O emissions, microbial communities, soil biochemical processes and winter barley growth to the addition of conventional and biodegradable microplastics
    Greenfield, L. M., Graf, M., Rengaraj, S., Bargiela, R., Williams, G., Golyshin, P. N., Chadwick, D. R. & Jones, D. L., 15 Sep 2022, In: Agriculture, Ecosystems and Environment. 336, 108023.
    Research output: Contribution to journal › Article › peer-review
  • PublishedIdentification of an Amylomaltase from the Halophilic Archaeon Haloquadratum walsbyi by Functional Metagenomics: Structural and Functional Insights
    Leoni, C., Manzari, C., Hai, T., Golyshin, P., Pesole, G., Volpicella, M. & Ceci, L. R., 7 Jan 2022, In: Life. 12, 1
    Research output: Contribution to journal › Article › peer-review
  • PublishedMicrobial Diversity of a Disused Copper Mine Site (Parys Mountain, UK), Dominated by Intensive Eukaryotic Filamentous Growth
    Distaso, M., Bargiela, R., Johnson, B., McIntosh, O., Williams, G., Jones, D. L., Golyshin, P. & Golyshina, O., 24 Aug 2022, In: Microorganisms . 10, 9, 1694.
    Research output: Contribution to journal › Article › peer-review
  • PublishedPrevalence of integrons in multidrug‑resistant Escherichia coli isolates from waters and vegetables in Nsukka and Enugu, Southeast Nigeria
    Chigor, C. B., Ibangha, I-A. I., Nweze, N. O., Onuora, V. C., Ozochi, C. A., Titilawo, Y., Enebe, M. C., Chernikova, T., Golyshin, P. & Chigor, V. N., Aug 2022, In: Environmental Science and Pollution Research. 29, 40, p. 60945-60952
    Research output: Contribution to journal › Article › peer-review

2021

  • PublishedCorrigendum: High Representation of Archaea Across All Depths in Oxic and Low-pH Sediment Layers Underlying an Acidic Stream
    Distaso, M. A., Bargiela, R., Brailsford, F. L., Williams, G. B., Wright, S., Lunev, E. A., Toshchakov, S. V., Yakimov, M. M., Jones, D. L., Golyshin, P. N. & Golyshina, O. V., 29 Jan 2021, In: Frontiers in Microbiology. 12, p. 633015
    Research output: Contribution to journal › Article › peer-review
  • PublishedLand cover and nutrient enrichment regulates low-molecular weight dissolved organic matter turnover in freshwater ecosystems
    Brailsford, F. L., Glanville, H. C., Marshall, M. R., Yates, C. A., Owen, A. T., Golyshin, P. N., Johnes, P. J. & Jones, D. L., Aug 2021, In: Limnology and Oceanography. 66, 8, p. 2979-2987 9 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedSea-Ice Bacteria Halomonas sp. Strain 363 and Paracoccus sp. Strain 392 Produce Multiple Types of Poly-3-Hydroxyalkaonoic Acid (PHA) Storage Polymers at Low Temperature
    Eronen-Rasimus, E., Hultman, J., Hai, T., Pessi, L. S., Wright, S., Laine, P., Viitamaki, S., Lyra, C., Thomas, D. N., Golyshin, P., Luhtanen, A. M., Kuosa, H. & Kaartokallio, H., 11 Aug 2021, In: Applied and Environmental Microbiology. 87, 17, e00929-21.
    Research output: Contribution to journal › Article › peer-review
  • PublishedStructure and evolutionary trace-assisted screening of a residue swapping the substrate ambiguity and chiral specificity in an esterase
    Cea-Rama, I., Coscolín, C., Katsonis, P., Bargiela, R., Golyshin, P., Lichtarge, O., Ferrer, M. & Sanz-Aparicio, J., 2021, In: Computational and Structural Biotechnology Journal. 19, p. 2307-2317 11 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedUtilization of low-molecular-weight organic compounds by the filterable fraction of a lotic microbiome
    Ghuneim, L. A., Distaso, M., Chernikova, T., Bargiela, R., Lunev, E. A., Korzhenkov, A. A., Toshchakov, S. V., Rojo, D., Barbas, C., Ferrer, M., Golyshina, O., Golyshin, P. & Jones, D. L., 1 Feb 2021, In: Fems Microbiology Ecology. 97, 2
    Research output: Contribution to journal › Article › peer-review

2020

  • PublishedDegradation of Hydrocarbons and Heavy Metal Reduction by Marine Bacteria in Highly Contaminated Sediments
    Dell'Anno, F., Brunet, C., van Zyl, L. J., Trindade, M., Golyshin, P., Dell'Anno, A., Ianora, A. & Sansone, C., 11 Sep 2020, In: Microorganisms . 8, 9
    Research output: Contribution to journal › Article › peer-review
  • PublishedDissimilatory sulfate reduction in the archaeon ‘Candidatus Vulcanisaeta moutnovskia’ sheds light on the evolution of sulfur metabolism
    Chernyh, N. A., Neukirchen, S., Frolov, E. N., Sousa, F. L., Miroshnichenko, M. L., Merkel, A. Y., Pimenov, N. V., Sorokin, D. Y., Ciordia, S., Mena, M. C., Ferrer, M., Golyshin, P., Lebedinsky, A. V., Cardoso Pereira, I. A. & Bonch-Osmolovskaya, E. A., Nov 2020, In: Nature Microbiology. 5, 11, p. 1428-+
    Research output: Contribution to journal › Article › peer-review
  • PublishedGenetically engineered proteins with two active sites for enhanced biocatalysis and synergistic chemo- and biocatalysis
    Alonso, S., Santiago, G., Cea-Rama, I., Fernandez-Lopez, L., Coscolín, C., Modregger, J., Ressmann, A. K., Martinez-Martinez, M., Marrero, H., Bargiela, R., Pita, M., Gonzalez-Alfonso, J. L., Briand, M. L., Rojo, D., Barbas, C., Plou, F. J., Golyshin, P., Shahgaldian, P., Sanz-Aparicio, J., Guallar, V. & Ferrer, M., Mar 2020, In: Nature Catalysis. 3, 3, p. 319-328
    Research output: Contribution to journal › Article › peer-review
  • PublishedHigh representation of archaea across all depths in oxic and low-pH sediment layers underlying an acidic stream
    Distaso, M., Bargiela, R., Brailsford, F., Williams, G., Wright, S., Lunev, E. A., Toshchakov, S. V., Yakimov, M. M., Jones, D. L., Golyshin, P. & Golyshina, O., 17 Nov 2020, In: Frontiers in Microbiology. 11, p. 576520
    Research output: Contribution to journal › Article › peer-review
  • PublishedHydrocarbon-Degrading Bacteria Alcanivorax and Marinobacter Associated With Microalgae Pavlova lutheri and Nannochloropsis oculata
    Chernikova, T., Bargiela, R., Toshchakov, S. V., Shivaraman, V., Lunev, E. A., Yakimov, M. M., Thomas, D. N. & Golyshin, P., 28 Oct 2020, In: Frontiers in Microbiology. 11, 572931.
    Research output: Contribution to journal › Article › peer-review
  • PublishedProtein expression in the obligate hydrocarbon‐degrading psychrophile Oleispira antarctica RB‐8 during alkane degradation and cold tolerance
    Gregson, B. H., Metodieva, G., Metodiev, M. V., Golyshin, P. & McKew, B. A., May 2020, In: Environmental Microbiology. 22, 5, p. 1870-1883
    Research output: Contribution to journal › Article › peer-review
  • PublishedProteome cold-shock response in the extremely acidophilic archaeon, Cuniculiplasma divulgatum
    Bargiela, R., Lanthaler, K., Potter, C., Ferrer, M., Yakunin, A., Paizs, B., Golyshin, P. & Golyshina, O., 19 May 2020, In: Microorganisms . 8, 5
    Research output: Contribution to journal › Article › peer-review
  • PublishedRapid depletion of dissolved organic sulphur (DOS) in freshwaters
    Brailsford, F. L., Glanville, H. C., Wang, D., Golyshin, P. N., Johnes, P. J., Yates, C. A. & Jones, D. L., 2 May 2020, In: Biogeochemistry. 149, 1, p. 105-113 9 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedSymbiosis between nanohaloarchaeon and haloarchaeon is based on utilization of different polysaccharides
    La Cono, V., Messina, E., Rohde, M., Arcadi, E., Ciordia, S., Crisafi, F., Denaro, R., Ferrer, M., Giuliano, L., Golyshin, P., Golyshina, O., Hallsworth, J. E., La Spada, G., Mena, M. C., Merkel, A. Y., Shevchenko, M. A., Smedile, F., Sorokin, D. Y., Toshchakov, S. V. & Yakimov, M. M., 18 Aug 2020, In: Proceedings of the National Academy of Sciences of the USA. 117, 33, p. 20223-20234 12 p.
    Research output: Contribution to journal › Article › peer-review

2019

  • PublishedArchaea dominate the microbial community in an ecosystem with low-to-moderate temperature and extreme acidity
    Korzhenkov, A. A., Toshchakov, S. V., Bargiela, R., Gibbard, H., Ferrer, M., Teplyuk, A. V., Jones, D. L., Kublanov, I. V., Golyshin, P. & Golyshina, O., 28 Jan 2019, In: Microbiome. 7, 1, 11.
    Research output: Contribution to journal › Article › peer-review
  • PublishedBioprospecting reveals class III ω-transaminases converting bulky ketones and environmentally relevant polyamines
    Coscolín, C., Katzke, N., Garcia-Moyano, A., Navarro-Fernández, J., Almendral, D., Martinez-Martinez, M., Bollinger, A., Bargiela, R., Gerler, C., Chernikova, T. N., Rojo, D., Barbas, C., Tran, H., Golyshina, O. V., Koch, R., Yakimov, M. M., Bjerga, G. E. K., Golyshin, P. N., Jaeger, K-E. & Ferrer, M., 9 Jan 2019, In: Applied and Environmental Microbiology. 85, 2, e02404-18.
    Research output: Contribution to journal › Article › peer-review
  • PublishedCuniculiplasmataceae, their ecogenomic and metabolic patterns and interactions with ‘ARMAN’
    Golyshina, O. V., Bargiela, R. & Golyshin, P. N., Jan 2019, In: Extremophiles. 23, 1, p. 1-7 7 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedDecoding the ocean's microbiological secrets for marine enzyme biodiscovery
    Ferrer, M., Mendez-Garcia, C., Bargiela, R., Chow, J., Alonso, S., Garcia-Moyano, A., Bjerga, G. E. K., Steen, I. H., Schwabe, T., Blom, C., Vester, J., Weckbecker, A., Shahgaldian, P., de Carvalho, C. C. C. R., Meskys, R., Zanaroli, G., Gloeckner, F. O., Fernandez-Guerra, A., Thambisetty, S., de la Calle, F., Golyshina V, O., Yakimov, M. M., Jaeger, K-E., Yakunin, A. F., Streit, W. R., McMeel, O., Calewaert, J-B., Tonne, N., Golyshin, P. N. & Consortium, INMARE., 1 Jan 2019, In: FEMS Microbiology Letters. 366, 1, fny285.
    Research output: Contribution to journal › Article › peer-review
  • PublishedDiversity of “Ca. Micrarchaeota” in two distinct types of acidic environments and their associations with Thermoplasmatales
    Golyshina, O., Bargiela, R., Toshchakov, S. V., Chernyh, N. A., Ramayah, S., Korzhenkov, A. A., Kublanov, I. V. & Golyshin, P., 15 Jun 2019, In: Genes. 10, 6, 461.
    Research output: Contribution to journal › Article › peer-review
  • PublishedMicrobial Communities of Polymetallic Deposits’ Acidic Ecosystems of Continental Climatic Zone With High Temperature Contrasts
    Gavrilov, S. N., Korzhenkov, A. A., Kublanov, I. V., Bargiela, R., Zamana, L. V., Toshchakov, S. V., Golyshin, P. & Golyshina, O., 17 Jul 2019, In: Frontiers in Microbiology.
    Research output: Contribution to journal › Article › peer-review
  • PublishedMicrobial uptake kinetics of dissolved organic carbon (DOC) compound groups from river water and sediments
    Brailsford, F. L., Glanville, H. C., Golyshin, P. N., Johnes, P. J., Yates, C. A. & Jones, D. L., 2 Aug 2019, In: Scientific Reports. 9, 1, 11229.
    Research output: Contribution to journal › Article › peer-review
  • PublishedNutrient enrichment induces a shift in dissolved organic carbon (DOC) metabolism in oligotrophic freshwater sediments
    Brailsford, F., Glanville, H., Golyshin, P., Marshall, M., Lloyd, C., Johnes, P. & Jones, D. L., 10 Nov 2019, In: Science of the Total Environment. 690, p. 1131-1139
    Research output: Contribution to journal › Article › peer-review

2018

  • PublishedDeterminants and prediction of esterase substrate promiscuity patterns
    Martínez-Martínez, M., Coscolín, C., Santiago, G., Chow, J., Stogios, P. J., Bargiela, R., Gertler, C., Navarro-Fernández, J., Bollinger, A., Thies, S., Méndez-García, C., Popovic, A., Brown, G., Chernikova, T., García-Moyano, A., Bjerga, G. E. K., Perez-Garcia, P., Hai, T., del Pozo, M. V., Stokke, R., Steen, I. H., Cui, H., Xu, X., Nocek, B., Alcaide, M., Disasto, M., Mesa, V., Pelaez, A. I., Sanchez, J., Buchholz, P. C. F., Pleiss, J., Fernández-Guerra, A., Glockner, F. O., Golyshina, O., Yakimov, M. M., Savchenko, A., Jaeger, K-E., Yakunin, A. F., Streit, W. R., Golyshin, P., Guallar, V. & Ferrer, M., 2018, In: ACS Chemical Biology. 13, 1, p. 225-234
    Research output: Contribution to journal › Article › peer-review
  • PublishedMembers of the Uncultured Taxon OP1 (''Acetothermia'') Predominate in the Microbial Community of an Alkaline Hot Spring at East-Tuvinian Upland
    Korzhenkov, A. A., Teplyuk, A. V., Lebedinsky, A. V., Khvashchevskaya, A. A., Kopylova, Y. G., Arakchaa, K. D., Golyshin, P. N., Lunev, E. A., Golyshina, O. V., Kublanov, I. V., Toshchakov, S. V. & Gavrilov, S. N., 2018, In: Microbiology. 87, 6, p. 783-795 13 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedMicrobiome and infectivity studies reveal complex polyspecies tree disease in Acute Oak Decline
    Denman, S., Doonan, J., Ransom-Jones, E., Broberg, M., Plummer, S., Kirk, S. A., Scarlett, K., Griffiths, A., Kaczmarek, M., Foster, J., Peace, A., Golyshin, P., Hassard, F., Brown, N., Kenny, J. G. & McDonald, J., 2018, In: The ISME Journal. 12, p. 386-399
    Research output: Contribution to journal › Article › peer-review
  • PublishedNano-Sized and Filterable Bacteria and Archaea: Biodiversity and Function
    Ghuneim, L-A., Jones, D. L., Golyshin, P. & Golyshina, O., 21 Aug 2018, In: Frontiers in Microbiology. 9, 1971.
    Research output: Contribution to journal › Article › peer-review
  • PublishedProteogenomic Analysis of Epibacterium Mobile BBCC367, a Relevant Marine Bacterium Isolated From the South Pacific Ocean
    Matallana-Surget, S., Werner, J., Wattiez, R., Lebaron, K., Intertaglia, L., Regan, C., Morris, J., Teeling, H., Ferrer, M., Golyshin, P., Gerogiorgis, D., Reilly, S. I. & Lebaron, P., Dec 2018, In: Frontiers in Microbiology. 9, 3125.
    Research output: Contribution to journal › Article › peer-review
  • PublishedRational Engineering of Multiple Active Sites in an Ester Hydrolase
    Santiago, G., Martinez-Martinez, M., Alonso, S., Bargiela, R., Coscolín, C., Golyshin, P., Guallar, V. & Ferrer, M., Mar 2018, In: Biochemistry. 57, 15, p. 2245-2255
    Research output: Contribution to journal › Article › peer-review
  • PublishedRelationships between Substrate Promiscuity and Chiral Selectivity of Esterases from Phylogenetically and Environmentally Diverse Microorganisms
    Coscolín, C., Martínez-Martínez, M., Chow, J., Bargiela, R., García-Moyano, A., Bjerga, G. E. K., Bollinger, A., Stokke, R., Steen, I. H., Golyshina, O., Yakimov, M. M., Jaeger, K-E., Yakunin, A. F., Streit, W. R., Golyshin, P. & Ferrer, M., 5 Jan 2018, In: Catalysts. 8, 1, 10.
    Research output: Contribution to journal › Article › peer-review
  • PublishedScreening and Characterization of Novel Polyesterases from Environmental Metagenomes with High Hydrolytic Activity against Synthetic Polyesters
    Hajighasemi, M., Tchigvintsev, A., Nocek, B., Flick, R., Popovic, A., Hai, T., Khusnutdinova, A. N., Brown, G., Xu, X., Cui, H., Anstett, J., Chernikova, T., Bruls, T., Le Paslier, D., Yakimov, M. M., Joachimiak, A., Golyshina, O., Savchenko, A., Golyshin, P., Edwards, E. A. & Yakunin, A. F., 6 Nov 2018, In: Environmental Science and Technology. 52, 21, p. 12388-12401
    Research output: Contribution to journal › Article › peer-review
  • PublishedSulfur Respiration in a Group of Facultatively Anaerobic Natronoarchaea Ubiquitous in Hypersaline Soda Lakes
    Sorokin, D. Y., Messina, E., La Cono, V., Ferrero, M., Ciordia, S., Mena, M. C., Toshchakov, S. V., Golyshin, P. N. & Yakimoy, M. M., Oct 2018, In: Frontiers in Microbiology. 9, 2359.
    Research output: Contribution to journal › Article › peer-review

2017

  • PublishedA communal catalogue reveals Earth's multiscale microbial diversity
    Thompson, L. R., Sanders, J. G., McDonald, D., Amir, A., Ladau, J., Locey, K. J., Prill, R. J., Tripathi, A., Gibbons, S. M., Ackermann, G., Navas-Molina, J. A., Janssen, S., Kopylova, E., Vazquez-Baeza, Y., Gonzalez, A., Morton, J. T., Mirarab, S., Xu, Z. Z., Jiang, L., Haroon, M. F., Kanbar, J., Zhu, Q., Song, S. J., Kosciolek, T., Bokulich, N. A., Lefler, J., Brislawn, C. J., Humphrey, G., Owens, S. M., Hampton-Marcell, J., Berg-Lyons, D., McKenzie, V., Fierer, N., Fuhrman, J. A., Clauset, A., Stevens, R. L., Shade, A., Pollard, K. S., Goodwin, K. D., Jansson, J. K., Gilbert, J. A., Knight, R., Agosto Rivera, J. L., Al-Moosawi, L., Alverdy, J., Amato, K. R., Andras, J., Angenent, L. T., Antonopoulos, D. A., Apprill, A., Armitage, D., Ballantine, K., Bárta, J., Baum, J. K., Berry, A., Bhatnagar, A., Bhatnagar, M., Biddle, J. F., Bittner, L., Boldgiv, B., Bottos, E., Boyer, D. M., Braun, J., Brazelton, W., Brearley, F. Q., Campbell, A. H., Caporaso, J. G., Cardona, C., Carroll, J., Cary, S. C., Casper, B. B., Charles, T. C., Chu, H., Claar, D. C., Clark, R. G., Clayton, J. B., Clemente, J. C., Cochran, A., Coleman, M. L., Collins, G., Colwel, R. R., Contreras, M., Crary, B. B., Creer, S., Cristol, D. A., Crump, B. C., Cui, D., Daly, S. E., Davalos, L., Dawson, R. D., Defazio, J., Delsuc, F., Dionisi, H. M., Dominguez-Bello, M. G., Dowell, R., Dubinsky, E. A., Dunn, P. O., Ercolini, D., Espinoza, R. E., Ezenwa, V., Fenner, N., Findlay, H. S., Fleming, I. D., Fogliano, V., Forsman, A., Freeman, C., Friedman, E. S., Galindo, G., Garcia, L., Garcia-Amado, M. A., Garshelis, D., Gasser, R. B., Gerdts, G., Gibson, M. K., Gifford, I., Gill, R. T., Giray, T., Gittel, A., Golyshin, P., Gong, D., Grossart, H-P., Guyton, K., Haig, S-J., Hale, V., Hall, R. S., Hallam, S. J., Handley, K. M., Hasan, N. A., Haydon, S. R., Hickman, J. E., Hidalgo, G., Hofmockel, K. S., Hooker, J., Hulth, S., Hultman, J., Hyde, E., Ibáñez-Álamo, J. D., Jastrow, J. D., Jex, A. R., Johnson, L. S., Johnston, E. R., Joseph, S., Jurburg, S. D., Jurelevicius, D., Karlsson, A., Karlsson, R., Kauppinen, S., Kellogg, C. T. E., Kennedy, S. J., Kerkhof, L. J., King, G. M., Kling, G. W., Koehler, A. V., Krezalek, M., Kueneman, J., Lamendella, R., Landon, E. M., Lane-deGraaf, K., LaRoche, J., Larsen, P., Laverock, B., Lax, S., Lentino, M., Levin, I. I., Liancourt, P., Liang, W., Linz, A. M., Lipson, D. A., Liu, Y., Lladser, M. E., Lozada, M., Spirito, C. M., MacCormack, W. P., MacRae-Crerar, A., Magris, M., Martín-Platero, A. M., Martín-Vivaldi, M., Martínez, L. M., Martínez-Bueno, M., Marzinelli, E. M., Mason, O. U., Mayer, G. D., McDevitt-Irwin, J. M., McDonald, J., McGuire, K. L., McMahon, K. D., McMinds, R., Medina, M., Mendelson, J. R., Metcalf, J. L., Meyer, F., Michelangeli, F., Miller, K., Mills, D. A., Minich, J., Mocali, S., Moitinho-Silva, L., Moore, A., Morgan-Kiss, R. M., Munroe, P., Myrold, D., Neufeld, J. D., Ni, Y., Nicol, G. W., Nielsen, S., Nissimov, J. I., Niu, K., Nolan, M. J., Noyce, K., O’Brien, S. L., Okamoto, N., Orlando, L., Ortiz Castellano, Y., Osuolale, O., Oswald, W., Parnell, J., Peralta-Sánchez, J. M., Petraitis, P., Pfister, C., Pilon-Smits, E., Piombino, P., Pointing, S. B., Pollock, F. J., Potter, C., Prithiviraj, B., Quince, C., Rani, A., Ranjan, R., Rao, S., Rees, A. P., Richardson, M., Riebesell, U., Robinson, C., Rockne, K. J., Rodriguezl, S. M., Rohwer, F., Roundstone, W., Safran, R. J., Sangwan, N., Sanz, V., Schrenk, M., Schrenzel, M. D., Scott, N. M., Seger, R. L., Seguin-Orlando, A., Seldin, L., Seyler, L. M., Shakhsheer, B., Sheets, G. M., Shen, C., Shi, Y., Shin, H., Shogan, B. D., Shutler, D., Siegel, J., Simmons, S., Sjöling, S., Smith, D. P., Soler, J. J., Sperling, M., Steinberg, P. D., Stephens, B., Stevens, M. A., Taghavi, S., Tai, V., Tait, K., Tan, C. L., Tas, N., Taylor, D. L., Thomas, T., Timling, I., Turner, B. L., Urich, T., Ursell, L. K., van der Lelie, D., Van Treuren, W., van Zwieten, L., Vargas-Robles, D., Vega Thurber, R., Vitaglione, P., Walker, D. A., Walters, W. A., Wang, S., Wang, T., Weave, T., Webster, N. S., Wehrle, B., Weisenhorn, P., Weiss, S., Werner, J. J., West, K., Whitehead, A., Whitehead, S. R., Whittingham, L. A., Willerslev, E., Williams, A. E., Wood, S. A., Woodhams, D. C., Yang, Y., Zaneveld, J., Zarraonaindia, I., Zhang, Q. & Zhao, H., 23 Nov 2017, In: Nature. 551, 7681, p. 457-+
    Research output: Contribution to journal › Article › peer-review
  • PublishedActivity screening of environmental metagenomic libraries reveals novel carboxylesterase families
    Popovic, A., Hai, T., Tchigvintsev, A., Hajighasemi, M., Nocek, B., Khusnutdinova, A. N., Brown, G., Glinos, J., Flick, R., Skarina, T., Chernikova, T., Yim, V., Bruls, T., Le Paslier, D., Yakimov, M. M., Joachimiak, A., Ferrer, M., Golyshina, O., Savchenko, A., Golyshin, P. & Yakunin, A. F., Mar 2017, In: Scientific Reports. 7, 44103, 44103.
    Research output: Contribution to journal › Article › peer-review
  • PublishedBuwchitin: A Ruminal Peptide with Antimicrobial Potential against Enterococcus faecalis
    Oyama, L. B., Crochet, J-A., Edwards, J. E., Girdwood, S. E., Cookson, A. R., Fernandez-Fuentes, N., Hilpert, K., Golyshin, P., Golyshina, O., Prive, F., Hess, M., Mantovani, H. C., Creevey, C. J. & Huws, S. A., 12 Jul 2017, In: Frontiers in Chemistry.
    Research output: Contribution to journal › Article › peer-review
  • PublishedDiscovery of anaerobic lithoheterotrophic haloarchaea, ubiquitous in hypersaline habitats
    Sorokin, D. Y., Messina, E., Smedile, F., Roman, P., Sinninghe Damste, J. S., Ciordia, S., Mena, M. C., Ferrer, M., Golyshin, P., Kublanov, I. V., Samarov, N. I., Toshchakov, S. V., La Cono, V. & Yakimov, M. M., 20 Jan 2017, In: ISME Journal. 11, p. 1245-1260
    Research output: Contribution to journal › Article › peer-review
  • PublishedDiscovery of extremely halophilic, methyl-reducing euryarchaea provides insights into the evolutionary origin of methanogenesis
    Sorokin, D. Y., Makarova, K. S., Abbas, B., Ferrer, M., Golyshin, P., Galinski, E. A., Ciordia, S., Mena, M. C., Merkel, A. Y., Wolf, Y. I., van Loosdrecht, M. C. M. & Koonin, E. V., May 2017, In: Nature Microbiology. 2, 17081 .
    Research output: Contribution to journal › Article › peer-review
  • PublishedFerrous iron- and ammonium-rich diffuse vents support habitat-specific communities in a shallow hydrothermal field off the Basiluzzo Islet (Aeolian Volcanic Archipelago)
    Bortoluzzi, G., Romeo, T., La Cono, V., La Spada, G., Smedile, F., Esposito, V., Sabatino, G., Di Bella, M., Canese, S., Scotti, G., Bo, M., Giuliano, L., Golyshin, P., Jones, D., Yakimov, M. M. & Andaloro, F., Sep 2017, In: Geobiology. 15, 5, p. 664-677
    Research output: Contribution to journal › Article › peer-review
  • PublishedMetabolic and evolutionary patterns in the extremely acidophilic archaeon Ferroplasma acidiphilum YT
    Golyshina, O., Hai, T., Reva, O. N., Lemak, S., Yakunin, A. F., Goesmann, A., Nechitaylo, T. Y., LaCono, V., Smedile, F., Slesarev, A., Rojo, D., Barbas, C., Ferrer, M., Yakimov, M. M. & Golyshin, P., 16 Jun 2017, In: Scientific Reports. 7, 3682.
    Research output: Contribution to journal › Article › peer-review
  • PublishedMicrobial use of low molecular weight DOM in filtered and unfiltered freshwater: Role of ultra-small microorganisms and implications for water quality monitoring
    Brailsford, F., Glanville, H., Marshall, M., Golyshin, P., Jones, P. J., Yates, C. A., Owen, A. T. & Jones, D. L., 15 Nov 2017, In: Science of the Total Environment. 598, p. 377-384
    Research output: Contribution to journal › Article › peer-review
  • PublishedMonaibacterium marinum, gen. nov, sp. nov, a new member of the Alphaproteobacteria isolated from seawater of Menai Straits, Wales, UK
    Chernikova, T., Dallimore, J., Lunsdorf, H., Heipieper, H. J. & Golyshin, P., 1 Sep 2017, In: International Journal of Systematic Evolutionary Microbiology. 67, p. 3310-3317
    Research output: Contribution to journal › Article › peer-review
  • PublishedMultidrug Resistance and High Prevalence of class 1 Integrons in Escherichia coli Isolated from Irrigation Water and Vegetables in Parts of Nsukka and Enugu, Nigeria
    Chigor, C. B., Ibangha, I-A. I., Onuora, V. C., Omotosho, O. E., Chernikova, T., Chigor, V. N. & Golyshin, P., 1 Apr 2017, In: Faseb Journal. 31, S1, 777.22.
    Research output: Contribution to journal › Meeting Abstract › peer-review
  • PublishedSubtle shifts in microbial communities occur alongside the release of carbon induced by drought and rewetting in contrasting peatland ecosystems
    Potter, C., Freeman, C., Golyshin, P., Ackerman, G., Fenner, N., McDonald, J., Ehbair, A., Jones, T., Murphy, L. & Creer, S., Sep 2017, In: Scientific Reports. 7, 11314.
    Research output: Contribution to journal › Article › peer-review
  • PublishedThe genome analysis of Oleiphilus messinensis ME102 (DSM 13489T) reveals backgrounds of its obligate alkane-devouring marine lifestyle
    Toshchakov, S. V., Korzhenkov, A. A., Chernikova, T., Ferrer, M., Golyshina, O., Yakimov, M. M. & Golyshin, P., Dec 2017, In: Marine Genomics. 36, p. 41-47
    Research output: Contribution to journal › Article › peer-review
  • PublishedThe rumen microbiome: an underexplored resource for novel antimicrobial discovery
    Oyama, L. B., Girdwood, S. E., Cookson, A. R., Fernanadez-Fuentes, N., Prive, F., Vallin, H. E., Wilkinson, T. J., Golyshin, P., Golyshina, O., Mikut, R., Hilpert, K., Richards, J., Wootton, M., Edwards, J. E., Maresca, M., Perrier, J., Lundy, F. T., Luo, Y., Zhou, M., Hess, M., Mantovani, H. C., Creevey, C. J. & Huws, S. A., 1 Dec 2017, In: NPJ Biofilms and Microbiomes. 3, 33 .
    Research output: Contribution to journal › Article › peer-review
  • Published“ARMAN” archaea depend on association with euryarchaeal host in culture and in situ
    Golyshina, O., Toshchakov, S. V., Makarova, K. S., Gavrilov, S. N., Korzhenkov, A. A., La Cono, V., Arcadi, E., Nechitaylo, T. Y., Ferrer, M., Kublanov, I. V., Wolf, Y. I., Yakimov, M. M. & Golyshin, P., 2017, In: Nature Communications. 8, 60.
    Research output: Contribution to journal › Article › peer-review

2016

  • PublishedAnalysis of defence systems and a conjugative IncP-1 plasmid in the marine polyaromatic hydrocarbons-degrading bacterium Cycloclasticus sp. 78-ME
    Yakimov, M. M., Crisafi, F., Messina, E., Smedile, F., Lopatina, A., Denaro, R., Pieper, D. H., Golyshin, P. & Giuliano, L., 5 Jul 2016, In: Environmental Microbiology Reports. 8, 4, p. 508-519
    Research output: Contribution to journal › Article › peer-review
  • PublishedAntibacterial Activity and Mechanism of Action of a novel Antimicrobial Peptide Palg1 and its potential against Enterococcus Faecalis Infection
    Oyama, L., Crochet, J. -A., Girdwood, S., Cookson, A., Prive, F., Fernandez-Fuentes, N., Edwards, J., Mikut, R., Hilpert, K., Golyshin, P., Golyshina, O., Creevey, C. & Huws, S., Sep 2016, In: Journal of Peptide Science. 22, S2, p. S188-S188
    Research output: Contribution to journal › Meeting Abstract › peer-review
  • PublishedBiochemical and structural insights into enzymatic depolymerization of polylactic acid and other polyesters by microbial carboxylesterases
    Hajighasemi, M., Nocek, B. P., Tchigvintsev, A., Brown, G., Flick, R., Xu, X., Cui, H., Hai, T., Joachimiak, A., Golyshin, P., Savchenko, A., Edwards, E. A. & Yakunin, A. F., 18 Apr 2016, In: Biomacromolecules. 17, 6, p. 2027-2039
    Research output: Contribution to journal › Article › peer-review
  • PublishedBiodiversity for biocatalysis: A review of the α/β-hydrolase fold superfamily of esterases-lipases discovered in metagenomes
    Ferrer, M., Bargiela, R., Martínez-Martínez, M., Mir, J., Koch, R., Golyshina, O. & Golyshin, P., 1 Mar 2016, In: Biocatalysis and Biotransformation . 33, 5-6, p. 235-249
    Research output: Contribution to journal › Article › peer-review
  • PublishedBiology of archaea from a novel family Cuniculiplasmataceae (Thermoplasmata) ubiquitous in hyperacidic environments
    Golyshina, O., Kublanov, I. V., Hai, T., Korzhenkov, A. A., Lunsdorf, H., Nechitaylo, T. Y., Toshchakov, S. V. & Golyshin, P., Dec 2016, In: Scientific Reports. 6, 39034.
    Research output: Contribution to journal › Article › peer-review
  • PublishedCombined whole-cell high-throughput functional screening for identification of new nicotinamidases/pyrazinamidases in metagenomic/polygenomic libraries
    Zapata-Perez, R., Garcia-Saura, A. G., Jebbar, M., Golyshin, P. & Sanchez-Ferrer, A., Nov 2016, In: Frontiers in Microbiology. 7, 1915.
    Research output: Contribution to journal › Article › peer-review
  • PublishedElemental sulfur and acetate can support life of a novel strictly anaerobic haloarchaeon
    Sorokin, D. Y., Kublanov, I. V., Gavrilov, S. N., Rojo, D., Roman, P., Golyshin, P., Slepak, V. Z., Smedile, F., Ferrer, M., Messina, E., La Cono, V. & Yakimov, M. M., Jan 2016, In: ISME Journal. 10, p. 240-252
    Research output: Contribution to journal › Article › peer-review
  • PublishedEstimating the success of enzyme bioprospecting through metagenomics: current status and future trends
    Ferrer, M., Martinez, M., Bargiela, R., Streit, W. R., Golyshina, O. & Golyshin, P., 1 Jan 2016, In: Microbial Biotechnology. 9, 1, p. 22-34
    Research output: Contribution to journal › Article › peer-review
  • PublishedInsights into the degradation capacities of Amycolatopsis tucumanensis DSM 45259 guided by microarray data
    Bourguignon, N., Bargiela, R., Rojo, D., Chernikova, T., Lopez de Rodas, S. A., Garcia-Cantalejo, J., Nather, D. J., Golyshin, P., Barbas, C., Ferrero, M. & Ferrer, M., 1 Dec 2016, In: World Journal of Microbiology and Biotechnology. 32, 201
    Research output: Contribution to journal › Article › peer-review
  • PublishedShotgun Metagenomic Sequencing Analysis of Soft-Rot Enterobacteriaceae in Polymicrobial Communities
    Doonan, J., Denman, S., McDonald, J. & Golyshin, P., 30 Nov 2016, Metagenomics. Streit, W. R. & Daniel, R. (eds.). Springer New York, Vol. 1539. p. 85-97 (Methods in Molecular Biology; vol. 1539).
    Research output: Chapter in Book/Report/Conference proceeding › Chapter
  • PublishedStructural and functional characterization of a ruminal β-glycosidase defines a novel subfamily of glycosyl hydrolase family 3 with permuted domain topology
    Ramirez-Escudero, M., del Pozo, M. V., Marin-Navarro, J., Gonzalez, B., Golyshin, P., Polaina, J., Ferrer, M. & Sanz-Aparico, J., 11 Nov 2016, In: Journal of Biological Chemistry. 291, p. 24200-24214
    Research output: Contribution to journal › Article › peer-review
  • PublishedThe novel extremely acidophilic, cell-wall-deficient archaeon Cuniculiplasma divulgatum gen. nov., sp. nov. represents a new family, Cuniculiplasmataceae fam. nov., of the order Thermoplasmatales
    Golyshina, O., Lünsdorf, H., Kublanov, I. V., Goldenstein, N. I., Hinrichs, K-U. & Golyshin, P., Jan 2016, In: International Journal of Systematic and Evolutionary Microbiology. 66, 1, p. 332-340
    Research output: Contribution to journal › Article › peer-review

2015

  • PublishedBacterial population and biodegradation potential in chronically crude oil-contaminated marine sediments are strongly linked to temperature
    Bargiela, R., Mapelli, F., Rojo, D., Chouaia, B., Tornés, J., Borin, S., Richter, M., Del Pozo, M. V., Cappello, S., Gertler, C., Genovese, M., Denaro, R., Martínez-Martínez, M., Fodelianakis, S., Amer, R. A., Bigazzi, D., Han, X., Chen, J., Chernikova, T. N., Golyshina, O. V., Mahjoubi, M., Jaouanil, A., Benzha, F., Magagnini, M., Hussein, E., Al-Horani, F., Cherif. A., N. V., Blaghen, M., Abdel-Fattah, Y. R., Kalogerakis, N., Barbas, C., Malkawi, H. I., Golyshin, P. N., Yakimov, M. M., Daffonchio, D. & Ferrer, M., 29 Jun 2015, In: Scientific Reports. 5, p. Article Number 11651
    Research output: Contribution to journal › Article › peer-review
  • PublishedConversion of Uric Acid into Ammonium in Oil-Degrading Marine Microbial Communities: a Possible Role of Halomonads
    Gertler, C., Bargiela, R., Mapelli, F., Han, X. F., Chen, J. W., Hai, T., Amer, R. A., Mahjoubi, M., Malkawi, H., Magagnini, M., Cherif, A., Abdel-Fattah, Y. R., Kalogerakis, N., Daffonchio, D., Ferrer, M. & Golyshin, P. N., 1 Oct 2015, In: Microbial Ecology. 70, 3, p. 724-740
    Research output: Contribution to journal › Article › peer-review
  • PublishedDegradation Network Reconstruction in Uric Acid and Ammonium Amendments in Oil-Degrading Marine Microcosms Guided by Metagenomic Data
    Bargiela, R., Gertler, C., Mapelli, F., Magagnini, M., Chen, J., Daffonchio, D., Golyshin, P. & Ferrer, M., 24 Nov 2015, In: Frontiers in Microbiology. 6
    Research output: Contribution to journal › Article › peer-review
  • PublishedDiversity of hydrolases from hydrothermal vent sediments of the Levante Bay, Vulcano Island (Aeolian archipelago) identified by activity-based metagenomics and biochemical characterization of new esterases and an arabinopyranosidase
    Placido, A., Hai, T., Ferrer, M., Chernikova, T. N., Distaso, M. A., Armstrong, D., Yakunin, A. F., Toshchakov, S. V., Yakimov, M. M., Kublanov, I. V., Golyshina, O., Pesole, G., Ceci, L. R. & Golyshin, P., 1 Dec 2015, In: Applied Microbiology and Biotechnology. 99, 23, p. 10031-10046
    Research output: Contribution to journal › Article › peer-review
  • PublishedGenome sequence of obligate marine polycyclic aromatic hydrocarbons-degrading bacterium Cycloclasticus sp 78-ME, isolated from petroleum deposits of the sunken tanker Amoco Milford Haven, Mediterranean Sea
    Messina, E., Denaro, R., Crisafi, F., Smedile, F., Cappello, S., Genovese, M., Genovese, L., Giuliano, L., Russo, D., Ferrer, M. & Golyshin, P., 24 Oct 2015, In: Marine Genomics. 25, p. 11-13
    Research output: Contribution to journal › Article › peer-review
  • PublishedIdentification and characterization of carboxyl esterases of gill chamber-associated microbiota in the deep-sea shrimp Rimicaris exoculata using functional metagenomics
    Alcaide, M., Tchigvinstsev, A., Martinez-Martinez, M., Popovic, A., Reva, O. N., Lafraya, A., Bargiela, R. N., Nechitaylo, T. Y., Matesanz, R., Cambon-Bonavita, M., Jebbar, M., Savchenko, A., Yakimov, M. M., Golyshina, O., Yakunin, A. F., Golyshin, P., Ferrer, M. & The MAMBA Consortium., N. V., 16 Jan 2015, In: Applied and Environmental Microbiology. 81, 6, p. 2125-2136
    Research output: Contribution to journal › Article › peer-review
  • PublishedIsolation and characterization of novel lipases/esterases from a bovine rumen metagenome
    Prive, F., Newbold, C. J., Kaderbhai, N. N., Girdwood, S. G., Golyshina, O. V., Golyshin, P. N., Scollan, N. D. & Huws, S. A., 11 Jan 2015, In: Applied Microbiology and Biotechnology. 99, 13, p. 5475-5485
    Research output: Contribution to journal › Article › peer-review
  • PublishedMetagenomics as a tool for enzyme discovery: hydrolytic enzymes from marine-related metagenomes
    Popovic, A., Tchigvintsev, A., Tran, H., Chernikova, T. N., Golyshina, O. V., Yakimov, M. M., Golyshin, P. N. & Yakunin, A. F., 2015, Prokaryotic Systems Biology. Springer, p. 1-20 20 p.
    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
  • PublishedMetaproteomics and metabolomics analyses of chronically petroleum-polluted sites reveal the importance of general anaerobic processes uncoupled with degradation
    Bargiela, R., Herbst, F. A., Martinez-Martinez, M., Seifert, J., Rojo, D., Cappello, S., Genovese, M., Crisafi, F., Denaro, R., Chernikova, T. N., Barbas, C., von Bergen, M., Yakimov, M. M., Ferrer, M. & Golyshin, P. N., 27 Aug 2015, In: Proteomics. 15, 20, p. 3508-3520
    Research output: Contribution to journal › Article › peer-review
  • PublishedMicrobial community of the deep-sea brine Lake Kryos seawater-brine interface is active below the chaotropicity limit of life as revealed by recovery of mRNA
    Golyshin, P., Yakimov, M. M., La Cono, V., La Spada, G., Bortoluzzi, G., Messina, E., Smedile, F., Arcadi, E., Borghini, M., Ferrer, M., Schmitt-Kopplin, P., Hertkorn, N., Cray, J. A., Hallsworth, J. E., Golyshin, P. N. & Giuliano, L., 1 Feb 2015, In: Environmental Microbiology. 17, 2, p. 364-382
    Research output: Contribution to journal › Article › peer-review
  • PublishedTerrestrial Invertebrate Animal Metagenomics, Lumbricidae
    Nechitaylo, T. Y., Ferrer, M., Golyshin, P. N. & Nelson, K. E. (ed.), 18 Feb 2015, Encyclopedia of Metagenomics. 2015 ed. Springer, p. 1-10
    Research output: Chapter in Book/Report/Conference proceeding › Chapter
  • PublishedThe environment shapes microbial enzymes: five cold-active and salt-resistant carboxylesterases from marine metagenomes
    Tchigvintsev, A., Tran, H., Popvic, A., Kovacic, F., Brown, G., Flick, R., Hajighasemi, M., Egorova, O., Somody, J. C., Tchigvintsev, D., Khusnutdinova, A., Chernikova, T. N., Golyshina, O., Yakimov, M. M., Savchenko, A., Golyshin, P., Jaeger, K. E. & Yakunin, A. F., 1 Mar 2015, In: Applied Microbiology and Biotechnology. 99, 5, p. 2165-2178
    Research output: Contribution to journal › Article › peer-review
  • PublishedThe intergenic transcribed spacer region 1 as a molecular marker for identification and discrimination of Enterobacteriaceae associated with acute oak decline
    Doonan, J., Denman, S., Gertler, C., Pachebat, J. A., Golyshin, P. N. & McDonald, J. E., 1 Jan 2015, In: Journal of Applied Microbiology. 118, 1, p. 193-201 9 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedThe ocean sampling day consortium
    Golyshin, P., Kopf, A., Bicak, M., Kottmann, R., Schnetzer, J., Kostadinov, I., Lehmann, K., Fernandez-Guerra, A., Jeanthon, C., Rahav, E., Ullrich, M., Wichels, A., Gerdts, G., Polymenakou, P., Kotoulas, G., Siam, R., Abdallah, R. Z., Sonnenschein, E. C., Cariou, T., O'Gara, F., Jackson, S., Orlic, S., Steinke, M., Busch, J., Duarte, B., Cacador, I., Canning-Clode, J., Bobrova, O., Marteinsson, V., Reynisson, E., Loureiro, C. M., Luna, G. M., Quero, G. M., Loscher, C. R., Kremp, A., DeLorenzo, M. E., Ovreas, L., Tolman, J., LaRoche, J., Penna, A., Frischer, M., Davis, T., Katherine, B., Meyer, C. P., Ramos, S., Magalhaes, C., Jude-Lemeilleur, F., Aguirre-Macedo, M. L., Wang, S., Poulton, N., Jones, S., Collin, R., Fuhrman, J. A., Conan, P., Alonso, C., Stambler, N., Goodwin, K., Yakimov, M. M., Baltar, F., Bodrossy, L., Van De Kamp, J., Frampton, D. M., Ostrowski, M., Van Ruth, P., Malthouse, P., Claus, S., Deneudt, K., Mortelmans, J., Pitois, S., Wallom, D., Salter, I., Costa, R., Schroeder, D. C., Kandil, M. M., Amaral, V., Biancalana, F., Santana, R., Pedrotti, M. L., Yoshida, T., Ogata, H., Ingleton, T., Munnik, K., Rodriguez-Ezpeleta, N., Berteaux-Lecellier, V., Wecker, P., Cancio, I., Vaulot, D., Bienhold, C., Ghazal, H., Chaouni, B., Essayeh, S., Ettamimi, S., Zaid, E., Boukhatem, N., Bouali, A., Chahboune, R., Barrijal, S., Timinouni, M., El Otmani, F., Bennani, M., Mea, M., Todorova, N., Karamfilov, V., ten Hoopen, P., Cochrane, G., L'Haridon, S., Bizsel, K. C., Vezzi, A., Lauro, F. M., Martin, P., Jensen, R. M., Hinks, J., Gebbels, S., Rosselli, R., De Pascale, F., Schiavon, R., dos Santos, A., Villar, E., Pesant, S., Cataletto, B., Malfatti, F., Edirisinghe, R., Silveira, J. A., Barbier, M., Turk, V., Tinta, T., Fuller, W. J., Salihoglu, I., Serakinci, N., Ergoren, M. C., Bresnan, E., Iriberri, J., Nyhus, P. A., Bente, E., Karlsen, H. E., Golyshin, P. N., Gasol, J. M., Moncheva, S., Dzhembekova, N., Johnson, Z., Sinigalliano, C. D., Gidley, M. L., Zingone, A., Danovaro, R. & Tsiamis, G., 19 Jun 2015, In: Giga Science. 4, 27
    Research output: Contribution to journal › Article › peer-review

2014

  • PublishedAlcanivorax borkumensis produces an extracellular siderophore in iron-limitation condition maintaining the hydrocarbon-degradation efficiency
    Denaro, R., Crisafi, F., Russo, D., Genovese, M., Messina, E., Genovese, L., Carbone, M., Ciavatta, M. L., Ferrer, M., Golyshin, P. & Yakimov, M. M., 1 Oct 2014, In: Marine Genomics. 17, October, p. 43-52
    Research output: Contribution to journal › Article › peer-review
  • PublishedEffective bioremediation strategy for rapid in situ cleanup of anoxic marine sediments in mesocosm oil spill simulation
    Golyshin, P., Genovese, M., Crisafi, F., Denaro, R., Cappello, S., Russo, D., Calogero, R., Santisi, S., Catalfamo, M., Modica, A., Smedile, F., Genovese, L., Golyshin, P. N., Giuliano, L. & Yakimov, M. M., 14 Apr 2014, In: Frontiers in Microbiology.
    Research output: Contribution to journal › Article › peer-review
  • PublishedHalorhabdus tiamatea: proteogenomics and glycosidase activity measurements identify the first cultivated euryarchaeon from a deep-sea anoxic brine lake as potential polysaccharide degrader
    Werner, J., Ferrer, M., Michel, G., Mann, A. J., Huang, S., Juarez, S., Ciordia, S., Albar, J. P., Alcaide, M., La Cono, V., Yakimov, M. M., Antunes, A., Taborda, M., da Costa, M. S., Hai, T., Glockner, F. O., Golyshina, O. V., Golyshin, P. N. & Teeling, H., 1 Aug 2014, In: Environmental Microbiology. 16, 8, p. 2525-2537
    Research output: Contribution to journal › Article › peer-review
  • PublishedHeterotrophic bicarbonate assimilation is the main process of de novo organic carbon synthesis in hadal zone of the Hellenic Trench, the deepest part of Mediterranean Sea
    Golyshin, P., Yakimov, M. M., La Cono, V., Smedile, F., Crisafi, F., Arcadi, E., Leonardi, M., Decembrini, F., Catalfamo, M., Bargiela, R., Ferrer, M., Golyshin, P. & Giuliano, L., 1 Dec 2014, In: Environmental Microbiology Reports. p. 709-722
    Research output: Contribution to journal › Article › peer-review
  • PublishedPressure adaptation is linked to thermal adaptation in salt-saturated marine habitats
    Alcaide, M., Stogios, P. J., Lafraya, A., Tchigvintsev, A., Flick, R., Bargiela, R., Chernikova, T. N., Reva, O. N., Hai, T., Leggewie, C. C., Katzke, N., La Cono, V., Matesanz, R., Jebbar, M., Jaeger, K., Yakimov, M. M., Yakunin, A. F., Golyshin, P. N., Golyshina, O. V., Savchenko, A. & Ferrer, M., 17 Dec 2014, In: Environmental Microbiology. 17, 2, p. 332-345
    Research output: Contribution to journal › Article › peer-review
  • PublishedThe gill chamber epibiosis of deep-sea shrimp Rimicaris exoculata: an in-depth metagenomic investigation and discovery of Zetaproteobacteria
    Golyshina, O., Golyshin, P., Jan, C., Petersen, J. M., Werner, J., Teeling, H., Huang, S., Glockner, F. O., Golyshina, O. V., Dubilier, N., Golyshin, P. N., Jebbar, M. & Cambon-Bonavita, M. A., 1 Sep 2014, In: Environmental Microbiology. 16, 9, p. 2723-2738
    Research output: Contribution to journal › Article › peer-review

2013

  • PublishedBioreduction of Sheep Carcasses Effectively Contains and Reduces Pathogen Levels under Operational and Simulated Breakdown Conditions
    Golyshin, P., Gwyther, C. L., Jones, D. L., Golyshin, P. N., Edwards-Jones, G., McKillen, J., McNair, I., McDonald, J. E. & Williams, A. P., 21 May 2013, In: Environmental Science and Technology. 47, 10, p. 5267–5275
    Research output: Contribution to journal › Article › peer-review
  • PublishedBioremediation of Southern Mediterranean oil polluted sites comes of age
    Daffonchio, D., Ferrer, M., Mapelli, F., Cherif, A., Lafraya, A., Malkawi, H. I., Yakimov, M. M., Abdel-Fattah, Y. R., Blaghen, M., Golyshin, P. N., Kalogerakis, N., Boon, N., Magagnini, M. & Fava, F., 25 Sep 2013, In: New Biotechnology. 30, 6, p. 743-748
    Research output: Contribution to journal › Article › peer-review
  • PublishedGenome Sequence of Thalassolituus oleivorans MIL-1 (DSM 14913T)
    Hai, T., Golyshin, P. N., Werner, J., Chernikova, T. N., Tran, H., Ferrer, M., Yakimov, M. M., Teeling, H. & Golyshina, O. V., 18 Apr 2013, In: Genome Announcements. 1, 2, p. e00141-13
    Research output: Contribution to journal › Article › peer-review
  • PublishedGenome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica
    Golyshina, O., Hai, T., Kube, M., Chernikova, T. N., Al-Ramahi, Y., Beloqui, A., Lopez-Cortez, N., Guazzaroni, M. E., Heipieper, H. J., Klages, S., Kotsyurbenko, O. R., Langer, I., Nechitaylo, T. Y., Lünsdorf, H., Fernández, M., Juárez, S., Ciordia, S., Singer, A., Kagan, O., Egorova, O., Petit, P. A., Stogios, P., Kim, Y., Tchigvintsev, A., Flick, R., Denaro, R., Genovese, M., Albar, J. P., Reva, O. N., Martínez-Gomariz, M., Tran, H., Ferrer, M., Savchenko, A., Yakunin, A. F., Yakimov, M. M., Golyshina, O. V., Reinhardt, R. & Golyshin, P. N., 23 Jul 2013, In: Nature Communications. 4, p. 2156
    Research output: Contribution to journal › Article › peer-review
  • PublishedMetagenomic analysis of hadopelagic microbial assemblages thriving at the deepest part of Mediterranean Sea, Matapan-Vavilov Deep
    Smedile, F., Messina, E., La Cono, V., Tsoy, O., Monticelli, L. S., Borghini, M., Giuliano, L., Golyshin, P. N., Mushegian, A. & Yakimov, M. M., 1 Jan 2013, In: Environmental Microbiology. 15, 1, p. 167-182
    Research output: Contribution to journal › Article › peer-review
  • PublishedMicrobial life in the Lake Medee, the largest deep-sea salt-saturated formation
    Yakimov, M. M., La Cono, V., Slepak, V. Z., La Spada, G., Arcadi, E., Messina, E., Borghini, M., Monticelli, L. S., Rojo, D., Barbas, C., Golyshina, O. V., Ferrer, M., Golyshin, P. N. & Giuliano, L., 19 Dec 2013, In: Scientific Reports. 3, p. 3554
    Research output: Contribution to journal › Article › peer-review
  • PublishedSingle residues dictate the co-evolution of dual esterases: MCP hydrolases from the α/β hydrolase family
    Alcaide, M., Tornés, J., Stogios, P. J., Xu, X., Gertler, C., Di Leo, R., Bargiela, R., Lafraya, A., Guazzaroni, M. E., López‑Cortés, N., Chernikova, T. N., Golyshina, O. V., Nechitaylo, T. Y., Plumeier∥, I., Pieper∥, D. H., Yakimov, M. M., Savchenko, A., Golyshin, P. N. & Ferrer, M., 15 Aug 2013, In: Biochemical Journal. 454, 1, p. 157-166
    Research output: Contribution to journal › Article › peer-review

2012

  • PublishedChemolithotrophic Microorganisms and Microbial Community from the Desert Soil as Candidates for the Phobos-Grunt Space Return Mission
    Kotsyurbenko, O. R., Duplex, O. N. D., Roey, A., Golyshina, O. N., Golyshin, P. N. & Vorobyova, E. A., Dec 2012, In: Paleontological Journal. 46, 9, p. 1075-1076
    Research output: Contribution to journal › Meeting Abstract › peer-review
  • PublishedComposition and dynamics of biostimulated indigenous oil-degrading microbial consortia from the Irish, North and Mediterranean Seas: a mesocosm study
    Golyshin, P., Gertler, C., Näther, D. J., Cappello, S., Gerdts, G., Quilliam, R. S., Yakimov, M. M. & Golyshin, P. N., 1 Sep 2012, In: Fems Microbiology Ecology. 81, 3, p. 520-536
    Research output: Contribution to journal › Article › peer-review
  • PublishedFate of pathogens in a simulated bioreduction system for livestock carcasses
    Golyshin, P., Gwyther, C. L., Jones, D. L., Golyshin, P. N., Edwards-Jones, G. & Williams, A. P., 1 May 2012, In: Waste Management. 32, 5, p. 933-938
    Research output: Contribution to journal › Article › peer-review
  • PublishedFunctional Metagenomics Unveils a Multifunctional Glycosyl Hydrolase from the Family 43 Catalysing the Breakdown of Plant Polymers in the Calf Rumen
    Ferrer, M., Ghazi, A., Beloqui, A., Vieites, J. M., Lopez-Cortes, N., Marın-Navarro, J., Nechitaylo, T. Y., Guazzaroni, M. E., Polaina, J., Waliczek, A., Chernikova, T. N., Reva, O. N., Golyshina, O. V. & Golyshin, P. N., 25 Jun 2012, In: PLoS ONE. 7, 6, p. e38134
    Research output: Contribution to journal › Article › peer-review
  • PublishedGene Sets for Utilization of Primary and Secondary Nutrition Supplies in the Distal Gut of Endangered Iberian Lynx
    Alcaide, M., Messina, E., Richter, M., Bargiela, R., Peplies, J., Huws, S. A., Newbold, C. J., Golyshin, P. N., Simón, M. A., López, G., Yakimov, M. M. & Ferrer, M., 12 Dec 2012, In: PLoS ONE. 7, 12, p. e51521
    Research output: Contribution to journal › Article › peer-review
  • PublishedMethylorosula polaris gen. nov., sp. nov., an aerobic, facultatively methylotrophic psychrotolerant bacterium from tundra wetland soil
    Golyshin, P., Berestovskaya, J. J., Kotsyurbenko, O. R., Tourova, T. P., Kolganova, T. V., Doronina, N. V., Golyshin, P. N. & Vasilyeva, L. V., 1 Mar 2012, In: International Journal of Systematic Evolutionary Microbiology. 62, Pt 3, p. 638-646
    Research output: Contribution to journal › Article › peer-review
  • PublishedMicrobial β-glucosidases from cow rumen metagenome enhance the saccharification of lignocellulose in combination with commercial cellulase cocktail
    Del Pozo, M. V., Fernández-Arrojo, L., Gil-Martínez, J., Montesinos, A., Chernikova, T. N., Nechitaylo, T. Y., Waliszek, A., Tortajada, M., Rojas, A., Huws, S. A., Golyshina, O., Newbold, C. M., Polaina, J., Ferrer, M. & Golyshin, P., 12 Sep 2012, In: Biotechnology for Biofuels. 5, p. 73
    Research output: Contribution to journal › Article › peer-review
  • PublishedMineralization of low molecular weight carbon substrates in soil solution under laboratory and field conditions
    Glanville, H., Rousk, J., Golyshin, P. & Jones, D. L., 1 May 2012, In: Soil Biology and Biochemistry. 48, p. 88-95
    Research output: Contribution to journal › Article › peer-review
  • PublishedStructure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica
    Lemak, S., Tchigvintsev, A., Petit, P., Flick, R., Singer, A. U., Brown, G., Evdokimova, E., Egorova, O., Gonzalez, C. F., Chernikova, T. N., Yakimov, M. M., Kube, M., Reinhardt, R., Golyshin, P. N., Savchenko, A. & Yakunin, A. F., 15 Jul 2012, In: Biochemical Journal. 445, 2, p. 193-203
    Research output: Contribution to journal › Article › peer-review
  • PublishedTemperature and water controls on vegetation emergence, microbial dynamics, and soil carbon and nitrogen fluxes in a high Arctic tundra ecosystem
    Glanville, H. C., Hill, P. W., Maccarone, L. D., Golyshin, P. N., Murphy, D. V. & Jones, D. L., 1 Dec 2012, In: Functional Ecology. 26, 6, p. 1366-1380
    Research output: Contribution to journal › Article › peer-review
  • PublishedULIXES, unravelling and exploiting Mediterranean Sea microbial diversity and ecology for xenobiotics' and pollutants' clean up
    Daffonchio, D., Mapelli, F., Cherif, A., Malkawi, H. I., Yakimov, M. M., Abdel-Fattah, Y. R., Blaghen, M., Golyshin, P. N., Ferrer, M., Kalogerakis, N., Boon, N., Magagnini, M. & Fava, F., Sep 2012, In: Reviews in Environmental Science and Bio/Technology. 11, 3, p. 207-211
    Research output: Contribution to journal › Article › peer-review
  • PublishedUnveiling microbial life in the new deep-sea hypersaline Lake Thetis. Part II: a metagenomic study
    Ferrer, M., Werner, J., Chernikova, T. N., Bargiela, R., Fernández, L. L., Waldmann, J., Teeling, H., Golyshina, O. V., Glöckner, F. O., Yakimov, M. M. & Golyshin, P. N., 1 Jan 2012, In: Environmental Microbiology. 14, 1, p. 268-281
    Research output: Contribution to journal › Article › peer-review

2011

  • PublishedA novel platelet-activating factor acetylhydrolase discovered in a metagenome from the earthworm-associated microbial community
    Navarro-Fernández, J., Nechitaylo, T. Y., Guerrero, J. A., Golyshina, O. V., García-Carmona, F., Sánchez-Ferrer, A. & Golyshin, P. N., 1 Nov 2011, In: Environmental Microbiology. 13, 11, p. 3036-3046
    Research output: Contribution to journal › Article › peer-review
  • PublishedContribution of crenarchaeal autotrophic ammonia oxidizers to the dark primary production in Tyrrhenian deep waters (Central Mediterranean Sea).
    Golyshin, P., Yakimov, M. M., La Cono, V., Smedile, F., DeLuca, T., Juarez, S., Ciordia, S., Fernandez, M., Albar, J. P., Ferrer, M., Golyshin, P. N. & Giuliano, L., 1 Jun 2011, In: ISME Journal. 5, p. 945-961
    Research output: Contribution to journal › Article › peer-review
  • PublishedThe environmental and biosecurity characteristics of livestock carcass disposal methods: a review.
    Gwyther, C. L., Williams, A. P., Golyshin, P. N., Edwards-Jones, G. & Jones, D. L., 1 Apr 2011, In: Waste Management. 31, 4, p. 767-778
    Research output: Contribution to journal › Article › peer-review
  • PublishedTranscriptional profiling of the marine oil-degrading bacterium Alcanivorax borkumensis during growth on n-alkanes
    Sabirova, J. S., Becker, A., Lünsdorf, H., Nicaud, J-M., Timmis, K. N. & Golyshin, P. N., Jun 2011, In: FEMS Microbiology Letters. 319, 2, p. 160-8 9 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedUnveiling microbial life in new deep-sea hypersaline Lake Thetis. Part I: Prokaryotes and environmental settings
    Golyshin, P., Golyshina, O., La Cono, V., Smedile, F., Bortoluzzi, G., Arcadi, E., Maimone, G., Messina, E., Borghini, M., Oliveri, E., Mazzola, S., L'Haridon, S., Toffin, L., Genovese, L., Ferrer, M., Giuliano, L., Golyshin, P. N. & Yakimov, M. M., 1 Aug 2011, In: Environmental Microbiology. 13, 8, p. 2250-2268
    Research output: Contribution to journal › Article › peer-review

2010

  • PublishedA mesocosm study of the changes in marine flagellate and ciliate communities in a crude oil bioremediation trial
    Gertler, C., Näther, D. J., Gerdts, G., Malpass, M. C. & Golyshin, P. N., Jul 2010, In: Microbial Ecology. 60, 1, p. 180-91 12 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedDiversity of glycosyl hydrolases from cellulose-depleting communities enriched from casts of two earthworm species.
    Beloqui, A., Nechitaylo, T. Y., Lopez-Cortes, N., Ghazi, A., Guazzaroni, M. E., Polaina, J., Strittmatter, A. W., Reva, O., Waliczek, A., Yakimov, M. M., Golyshina, O. V., Ferrer, M. & Golyshin, P. N., 1 Sep 2010, In: Applied and Environmental Microbiology. 76, 17, p. 5934-5946
    Research output: Contribution to journal › Article › peer-review
  • PublishedEffect of the earthworms lumbricus terrestris and Aporrectodea caliginosa on bacterial diversity in soil.
    Nechitaylo, T. Y., Yakimov, M. M., Godinho, M., Timmis, K. N., Belogolova, E., Byzov, B. A., Kurakov, A. V., Jones, D. L. & Golyshin, P. N., 1 Apr 2010, In: Microbial Ecology. 59, 3, p. 574-587
    Research output: Contribution to journal › Article › peer-review
  • PublishedFate of prions in soil: degradation of recombinant prion in aqueous extracts from soil and casts of two earthworm species.
    Golyshin, P., Nechitaylo, T. Y., Timmis, K. N., Byzov, B. A., Kurakov, A. V., Belogolova, E., Jones, D. L., Ferrer, M. & Golyshin, P. N., 1 Jul 2010, In: Soil Biology and Biochemistry. 42, 7, p. 1168-1171
    Research output: Contribution to journal › Article › peer-review
  • PublishedGenomic signatures of fifth autotrophic carbon assimilation pathway in bathypelagic Crenarchaeota
    La Cono, V., Smedile, F., Ferrer, M., Golyshin, P. N., Giuliano, L. & Yakimov, M. M., Sep 2010, In: Microbial Biotechnology. 3, 5, p. 595-606 12 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedInter-conversion of catalytic abilities in a bifunctional carboxyl/feruloyl-esterase from earthworm gut metagenome
    Vieites, J. M., Ghazi, A., Beloqui, A., Polaina, J., Andreu, J. M., Golyshina, O. V., Nechitaylo, T. Y., Waliczek, A., Yakimov, M. M., Golyshin, P. N. & Ferrer, M., 1 Jan 2010, In: Microbial Biotechnology. 3, 1, p. 48-58
    Research output: Contribution to journal › Article › peer-review
  • PublishedMolecular methods to study complex microbial communities
    Vieites, J. M., Guazzaroni, M-E., Beloqui, A., Golyshin, P. N. & Ferrer, M., 2010, In: Methods in Molecular Biology. 668, p. 1-37 37 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedNovel Hybrid Esterase-Haloacid Dehalogenase Enzyme
    Beloqui, A., Polaina, J., Maria Vieites, J., Reyes-Duarte, D., Torres, R., Golyshina, O. V., Chernikova, T. N., Waliczek, A., Aharoni, A., Yakimov, M. M., Timmis, K. N., Golyshin, P. N. & Ferrer, M., 16 Aug 2010, In: ChemBioChem. 11, 14, p. 1975-1978
    Research output: Contribution to journal › Article › peer-review
  • PublishedScreening metagenomic libraries for laccase activities
    Ferrer, M., Beloqui, A. & Golyshin, P. N., Aug 2010, In: Methods in Molecular Biology. 668, p. 189-202 14 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedSystems approaches to microbial communities and their functioning
    Röling, W. F. M., Ferrer, M. & Golyshin, P. N., Aug 2010, In: Current Opinion in Biotechnology. 21, 4, p. 532-8 7 p.
    Research output: Contribution to journal › Review article › peer-review

2009

  • Published'Candidatus Lumbricincola', a novel lineage of uncultured Mollicutes from earthworms of family Lumbricidae.
    Nechitaylo, T. Y., Timmis, K. N. & Golyshin, P. N., 1 Apr 2009, In: Environmental Microbiology. 11, 4, p. 1016-1026
    Research output: Contribution to journal › Article › peer-review
  • PublishedA salt lake extremophile, Paracoccus bogoriensis sp nov., efficiently produces xanthophyll carotenoids
    Osanjo, G. O., Muthike, E. W., Tsuma, L., Okoth, M. W., Bulimo, W. D., Luensdorf, H., Abraham, W-R., Dion, M., Timmis, K. N., Golyshin, P. N. & Mulaa, F. J., Aug 2009, In: African Journal of Microbiology Research. 3, 8, p. 426-433
    Research output: Contribution to journal › Article › peer-review
  • PublishedAcidiplasma aeolicum gen. nov., sp nov., a euryarchaeon of the family Ferroplasmaceae isolated from a hydrothermal pool, and transfer of Ferroplasma cupricumulans to Acidiplasma cupricumulans comb. Nov
    Golyshina, O. V., Yakimov, M. M., Lunsdorf, H., Ferrer, M., Nimtz, M., Timmis, K. N., Wray, V., Tindall, B. J. & Golyshin, P. N., 1 Nov 2009, In: International Journal of Systematic and Evolutionary Microbiology. 59, p. 2815-2823
    Research output: Contribution to journal › Article › peer-review
  • PublishedBacterial consortium proteomics under 4-chlorosalicylate carbon-limiting conditions
    Bobadilla Fazzini, R. A., Bielecka, A., Quintas, A. K. P., Golyshin, P. N., Preto, M. J., Timmis, K. N. & dos Santos, V. A. P. M., Apr 2009, In: Proteomics. 9, 8, p. 2273-85 13 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedCulturable microorganisms from the earthworm digestive tract
    Byzov, B. A., Nechitaylo, T. Y., Bumazhkin, B. K., Kurakov, A. V., Golyshin, P. N. & Zvyagintsev, D. G., Jun 2009, In: Microbiology. 78, 3, p. 360-368
    Research output: Contribution to journal › Article › peer-review
  • PublishedMetagenomics approaches in Systems Microbiology.
    Golyshin, P., Vieities, J. M., Guazzaroni, M. E., Beloqui, A., Golyshin, P. N. & Ferrer, M., 1 Jan 2009, In: FEMS Microbiology Reviews. 33, 1, p. 236-255
    Research output: Contribution to journal › Article › peer-review
  • PublishedMetagenomics as a new technological tool to gain scientific knowledge.
    Guazzaroni, M. E., Beloqui, A., Golyshin, P. N. & Ferrer, M., 1 Jun 2009, In: World Journal of Microbiology and Biotechnology. 25, 6, p. 945-954
    Research output: Contribution to journal › Article › peer-review
  • PublishedMetagenomics for Mining New Genetic Resources of Microbial Communities.
    Ferrer, M., Beloqui, A., Timmis, K. N. & Golyshin, P. N., 1 Jan 2009, In: Journal of Molecular Microbiology and Biotechnology. 16, 1-2, p. 109-123
    Research output: Contribution to journal › Article › peer-review
  • PublishedMicrobial consortia in mesocosm bioremediation trial using oil sorbents, slow-release fertilizer and bioaugmentation.
    Golyshin, P., Gertler, C., Gerdts, G., Timmis, K. N. & Golyshin, P. N., 1 Aug 2009, In: Fems Microbiology Ecology. 69, 2, p. 288-300
    Research output: Contribution to journal › Article › peer-review
  • PublishedPopulations of heavy fuel oil-degrading marine microbial community in presence of oil sorbent materials.
    Gertler, C., Gerdts, G., Timmis, K. N., Yakimov, M. M. & Golyshin, P. N., 1 Aug 2009, In: Journal of Applied Microbiology. 107, 2, p. 590-605
    Research output: Contribution to journal › Article › peer-review
  • PublishedМикроорганизмы из пищеварительного тракта дождевых червей
    Byzov, B. A., Nechitaĭlo, T. I., Bumazhkin, B. K., Kurakov, A. V., Golyshin, P. N. & Zviagintsev, D. G., 8 Jul 2009, In: Mikrobiologiia. 78, 3, p. 404-13 10 p.
    Research output: Contribution to journal › Article › peer-review

2008

  • PublishedA purple acidophilic di-ferric DNA ligase from Ferroplasma.
    Golyshin, P., Ferrer, M., Golyshina, O. V., Beloqui, A., Bottger, L. H., Andreu, J. M., Polaina, J., De Lacey, A. L., Trautwein, A. X., Timmis, K. N. & Golyshin, P. N., 1 Jul 2008, In: Proceedings of the National Academy of Sciences of the USA. 105, 26, p. 8878-8883
    Research output: Contribution to journal › Article › peer-review
  • PublishedBiodegradation of Oil Hydrocarbons.
    Golyshin, P. N., 1 Jan 2008.
    Research output: Contribution to conference › Paper
  • PublishedDiversity of facultatively anaerobic microscopic mycelial fungi in soils.
    Golyshin, P., Kurakov, A. V., Lavrent'ev, R. B., Nechitailo, T. Y., Golyshin, P. N. & Zvyagintsev, D. G., 1 Jan 2008, In: Microbiology. 77, 1, p. 90-98
    Research output: Contribution to journal › Article › peer-review
  • PublishedGenomic insights into oil biodegradation in marine systems.
    Golyshin, P., Martins dos Santos, V. A., Yakimov, M. M., Timmis, K. N., Golyshin, P. N. & Diaz, E. (ed.), 1 Jan 2008, Microbial Biodegradation: Genomics and Molecular Biology. 2008 ed. Caister Academic Press, p. 269-296
    Research output: Chapter in Book/Report/Conference proceeding › Chapter
  • PublishedMining nature for new protein diversity.
    Golyshin, P. N., 7 Mar 2008.
    Research output: Contribution to conference › Paper
  • PublishedNiche-specificity factors of a marine oil-degrading bacterium Alcanivorax borkumensis SK2.
    Sabirova, J. S., Chernikova, T. N., Timmis, K. N. & Golyshin, P. N., 1 Aug 2008, In: FEMS Microbiology Letters. 285, 1, p. 89-96
    Research output: Contribution to journal › Article › peer-review
  • PublishedRecent trends in industrial microbiology.
    Beloqui, A., De Maria, P. D., Golyshin, P. N. & Ferrer, M., 1 Jun 2008, In: Current Opinion in Microbiology. 11, 3, p. 240-248
    Research output: Contribution to journal › Article › peer-review

2007

  • PublishedAcidophilic enzymes.
    Golyshin, P., Golyshina, O. V., Golyshin, P. N., Timmis, K. N. & Ferrer, M., 28 Nov 2007, Patent No. European Patent EP1859029
    Research output: Patent
  • PublishedAnalysis of storage livid accumulation in Alcanivorax borkumensis: Evidence for alternative triacylglycerol biosynthesis routes in bacteria.
    Golyshin, P., Kalscheuer, R., Stoveken, T., Malkus, U., Reichelt, R., Golyshin, P. N., Sabirova, J. S., Ferrer, M., Timmis, K. N. & Steinbuchel, A., 1 Feb 2007, In: Journal of Bacteriology. 189, 3, p. 918-928
    Research output: Contribution to journal › Article › peer-review
  • PublishedBiochemical and structural features of a novel cyclodextrinase from cow rumen metagenome.
    Ferrer, M., Beloqui, A., Golyshina, O. V., Plou, F. J., Neef, A., Chernikova, T. N., Fernandez-Arrojo, L., Ghazi, I., Ballesteros, A., Elborough, K., Timmis, K. N. & Golyshin, P. N., 1 Jan 2007, In: Biotechnology Journal. 2, 2, p. 207-213
    Research output: Contribution to journal › Article › peer-review
  • PublishedCatalytic role of conserved HQGE motif in the CE6 carbohydrate esterase family.
    Lopez-Cortes, N., Reyes-Duarte, D., Beloqui, A., Polaina, J., Ghazi, I., Golyshina, O. V., Ballesteros, A., Golyshin, P. N. & Ferrer, M., 2 Oct 2007, In: Febs Letters. 581, 24, p. 4657-4662
    Research output: Contribution to journal › Article › peer-review
  • PublishedCharacterization and role of a metalloprotease induced by chitin in Serratia sp KCK.
    Golyshin, P., Kim, H. S., Golyshin, P. N. & Timmis, K. N., 1 Nov 2007, In: Journal of Industrial Microbiology and Biotechnology. 34, 11, p. 715-721
    Research output: Contribution to journal › Article › peer-review
  • PublishedCharacterization of a chitinolytic enzyme from Serratia sp KCK isolated from kimchi juice.
    Kim, H. S., Timmis, K. N. & Golyshin, P. N., 1 Jul 2007, In: Applied Microbiology and Biotechnology. 75, 6, p. 1275-1283
    Research output: Contribution to journal › Article › peer-review
  • PublishedDiscovery of New Microbial Lineages from Extreme Environments and Their Unique Cellular Machinery with Implication to Hypothetical Extraterrestrial Ecosystems.
    Golyshin, P. N., 1 Jan 2007.
    Research output: Contribution to conference › Paper
  • PublishedExtracellular polyhydroxyalkanoates produced by genetically engineered microorganisms
    Golyshin, P., Sabirova, J. S., Ferrer, M., Abraham, W. R., Luensdorf, H., Timmis, K. N. & Golyshin, P. N., 14 Feb 2007, Patent No. European Patent EP1752532
    Research output: Patent
  • PublishedFunctional genome analysis of Alcanivorax borkumensis SK2.
    Golyshin, P. N., 1 Jan 2007.
    Research output: Contribution to conference › Paper
  • PublishedFunctional genome analysis of an ubiquitous alkane-degrading marine bacterium, Alcanivorax borkumensis SK2.
    Golyshin, P. N., 1 Jan 2007.
    Research output: Contribution to conference › Paper
  • PublishedLimits of life in MgCI2-containing environments: chaotropicity defines the window.
    Golyshin, P., Hallsworth, J. E., Yakimov, M. M., Golyshin, P. N., Gillion, J. L., D'Auria, G., de Lima Alves, F., La Cono, V., Genovese, M., McKew, B. A., Hayes, S. L., Harris, G., Giuliano, L., Timmis, K. N. & McGenity, T. J., 1 Mar 2007, In: Environmental Microbiology. 9, 3, p. 801-813
    Research output: Contribution to journal › Article › peer-review
  • PublishedMicrobial community of a hydrothermal mud vent underneath the deep-sea anoxic brine Lake Urania (eastern Mediterranean).
    Golyshin, P., Yakimov, M. M., Giuliano, L., Cappello, S., Denaro, R. & Golyshin, P. N., 1 Apr 2007, In: Origins of Life and Evolution of Biospheres. 37, 2, p. 177-188
    Research output: Contribution to journal › Article › peer-review
  • PublishedMicrobial metagenomes: moving forward industrial biotechnology.
    Ferrer, M., Beloqui, A. & Golyshin, P. N., 1 May 2007, In: Journal of Chemical Technology and Biotechnology. 82, 5, p. 421-423
    Research output: Contribution to journal › Article › peer-review
  • PublishedMining enzymes from extreme environments.
    Ferrer, M., Golyshina, O., Beloqui, A. & Golyshin, P. N., 1 Jun 2007, In: Current Opinion in Microbiology. 10, 3, p. 207-214
    Research output: Contribution to journal › Article › peer-review
  • PublishedNew Esterases from rumen.
    Ferrer, M., Golyshin, P. N., Golyshina, O. V., Chernikova, T. N., Strompl, C. & Timmis, K. N., 18 Apr 2007, Patent No. International Application WO 2006/003009 European Patent PCT/EP2005/007305.
    Research output: Patent
  • PublishedObligate oil-degrading marine bacteria.
    Golyshin, P., Yakimov, M. M., Timmis, K. N. & Golyshin, P. N., 1 Jun 2007, In: Current Opinion in Biotechnology. 18, 3, p. 257-266
    Research output: Contribution to journal › Article › peer-review
  • PublishedPolypeptides with laccase activity
    Ferrer, M., Golyshin, P. N., Golyshina, O. V., Chernikova, T. N., Strompl, C. & Timmis, K. N., 28 Aug 2007, Patent No. European Patent EP1826266
    Research output: Patent
  • PublishedPrimary producing prokaryotic communities of brine, interface and seawater above the halocline of deep anoxic lake L'Atalante, Eastern Mediterranean Sea.
    Golyshin, P., Yakimov, M. M., La Cono, V., Denaro, R., D'Auria, G., Decembrini, F., Timmis, K. N., Golyshin, P. N. & Giuliano, L., 1 Dec 2007, In: ISME Journal. 1, 8, p. 743-755
    Research output: Contribution to journal › Article › peer-review
  • PublishedReaction of microorganisms to the digestive fluid of earthworms.
    Khomyakov, N. V., Kharin, S. A., Nechitailo, T. Y., Golyshin, P. N., Kurakov, A. V., Byzov, B. A. & Zvyagintsev, D. G., 1 Jan 2007, In: Microbiology. 76, 1, p. 45-54
    Research output: Contribution to journal › Article › peer-review
  • PublishedShift from acetoclastic to H-2-dependent methanogenes is in a West Siberian peat bog at low pH values and isolation of an acidophilic Methanobactetium strain.
    Golyshin, P., Kotsyuobenko, O. R., Friedrich, M. W., Simankova, M. V., Nozhevnikova, A. N., Golyshin, P. N., Timmis, K. N. & Conrad, R., 1 Apr 2007, In: Applied and Environmental Microbiology. 73, 7, p. 2344-2348
    Research output: Contribution to journal › Article › peer-review
  • PublishedThe cellular machinery of Ferroplasma acidiphilum is iron-protein-dominated.
    Ferrer, M., Golyshina, O. V., Beloqui, A., Golyshin, P. N. & Timmis, K. N., 4 Jan 2007, In: Nature. 445, 7123, p. 91-94
    Research output: Contribution to journal › Article › peer-review

2006

  • PublishedCellulases from rumen.
    Ferrer, M., Golyshin, P. N., Golyshina, O. V., Chernikova, T. N., Strompl, C., Timmis, K. N., Elborough, K. & Jarvis, G., 4 Jan 2006, Patent No. EP1765999. International Patent Application WO 2006/00375 European Patent PCT/EP2005/053104.
    Research output: Patent
  • PublishedFunctional genome analysis of Alcanivorax borkumensis, an ubiquitous and efficient marine oil-degrader.
    Golyshin, P. N., 1 Jan 2006.
    Research output: Contribution to conference › Paper
  • PublishedGenome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis.
    Schneiker, S., Martins dos Santos, V. A. P., Bartels, D., Bekel, T., Brecht, M., Buhrmester, J., Chernikova, T. N., Denaro, R., Ferrer, M., Gertler, C., Goesmann, A., Golyshina, O. V., Kaminski, F., Khachane, A. N., Lang, S., Linke, B., McHardy, A. C., Meyer, F., Nechitaylo, T., Pühler, A., Regenhardt, D., Rupp, O., Sabirova, J. S., Selbitschka, W., Yakimov, M. M., Timmis, K. N., Vorhölter, F-J., Weidner, S., Kaiser, O. & Golyshin, P. N., 30 Jul 2006, In: Nature Biotechnology. 24, 8, p. 997-1004 8 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedLow temperature induced systems failure in Escherichia coli: Insights from rescue by cold-adapted chaperones.
    Golyshin, P., Strocchi, M., Ferrer, M., Timmis, K. N. & Golyshin, P. N., 1 Jan 2006, In: Proteomics. 6, 1, p. 193-206
    Research output: Contribution to journal › Article › peer-review
  • PublishedMechanism of cold sensitivity of E. coli and a new low temperature expression system for proteins.
    Golyshin, P. N., 1 Jan 2006.
    Research output: Contribution to conference › Paper
  • PublishedMutation in a "tesB-like" hydroxyacyl-coenzyme A-specific thioesterase gene causes hyperproduction of extracelluar polyhydroxyalkanoates by Alcanivorax orkumensis SK2.
    Golyshin, P., Sabirova, J. S., Ferrer, M., Lunsdorf, H., Wray, V., Kalscheuer, R., Steinbuchel, A., Timmis, K. N. & Golyshin, P. N., 1 Dec 2006, In: Journal of Bacteriology. 188, 24, p. 8452-8459
    Research output: Contribution to journal › Article › peer-review
  • PublishedNew protein diversity from extreme (meta)genomes.
    Golyshin, P. N., 1 Jan 2006.
    Research output: Contribution to conference › Paper
  • PublishedNew proteins from (meta)genomes of marine hydrocarbon-degrading organisms and their consortia.
    Golyshin, P. N., 1 Jan 2006.
    Research output: Contribution to conference › Paper
  • PublishedNovel polyphenol oxidase mined from a metagenome expression library of bovine rumen: biochemical properties, structural analysis, and phylogenetic relationships
    Beloqui, A., Pita, M., Polaina, J., Martínez-Arias, A., Golyshina, O. V., Zumárraga, M., Yakimov, M. M., García-Arellano, H., Alcalde, M., Fernández, V. M., Elborough, K., Andreu, J. M., Ballesteros, A., Plou, F. J., Timmis, K. N., Ferrer, M. & Golyshin, P. N., 11 Aug 2006, In: Journal of Biological Chemistry. 281, 32, p. 22933-42 10 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedProteomic insights into metabolic adaptations in Alcanivorax borkumensis induced by alkane utilization.
    Sabirova, J. S., Ferrer, M., Regenhardt, D., Timmis, K. N. & Golyshin, P. N., 1 Jun 2006, In: Journal of Bacteriology. 188, 11, p. 3763-3773
    Research output: Contribution to journal › Article › peer-review
  • PublishedPsychrophily and chaperones.
    Golyshin, P. N., 1 Jan 2006.
    Research output: Contribution to conference › Paper
  • PublishedStratified prokaryote network in the oxic-anoxic transition of a deep-sea halocline
    Daffonchio, D., Borin, S., Brusa, T., Brusetti, L., van der Wielen, PWJJ., Bolhuis, H., Yakimov, MM., D'Auria, G., Giuliano, L., Marty, D., Tamburini, C., McGenity, TJ., Hallsworth, JE., Sass, AM., Timmis, KN., Tselepides, A., de Lange, GJ., Hubner, A., Thomson, J., Varnavas, SP., Gasparoni, F., Gerber, HW., Malinverno, E., Corselli, C., Garcin, J., McKew, B., Golyshin, PN., Lampadariou, N., Polymenakou, P., Calore, D., Cenedese, S., Zanon, F. & Hoog, S., 9 Mar 2006, In: Nature. 440, 7081, p. 203-207
    Research output: Contribution to journal › Article › peer-review
  • PublishedSurprising features of extremely acidophilic and heavy metal-resistant archaeon, Ferroplasma acidiphilum.
    Golyshin, P. N., 1 Jan 2006.
    Research output: Contribution to conference › Paper
  • PublishedThe 'pH optimum anomaly' of intracellular enzymes of Ferroplasma acidiphilum
    Golyshina, O. V., Golyshin, P. N., Timmis, K. N. & Ferrer, M., 1 Mar 2006, In: Environmental Microbiology. 8, 3, p. 416-425
    Research output: Contribution to journal › Article › peer-review
  • PublishedTransgenic organisms with lower growth temperature.
    Ferrer, M., Golyshin, P. N., Chernikova, T. N., Timmis, K. N. & Yakimov, M. M., 28 Jun 2006, Patent No. European Patent EP1673442 B1
    Research output: Patent

2005

  • PublishedA novel alpha-glucosidase from the acidophilic archaeon Ferroplasma acidiphilum strain Y with high transglycosylation activity and an unusual catalytic nucleophile
    Ferrer, M., Golyshina, O. V., Plou, F. J., Timmis, K. N. & Golyshin, P. N., 15 Oct 2005, In: Biochemical Journal. 391, 2, p. 269-276 8 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedChemical biotechnology: what’s new, what’s next?
    Golyshin, P. & Golyshin, P. N., 1 Dec 2005, In: Current Opinion in Biotechnology. 16, 6, p. 585-587
    Research output: Contribution to journal › Article › peer-review
  • PublishedConversion of a carboxylesterase into a triacylglycerol lipase by a random mutation.
    Reyes-Duarte, D., Polaina, J., Lopez-Cortes, N., Alcalde, M., Plou, F. J., Elborough, K., Ballesteros, A., Timmis, K. N., Golyshin, P. N. & Ferrer, M., 1 Nov 2005, In: Angewandte Chemie - International Edition. 44, 46, p. 7553-7557
    Research output: Contribution to journal › Article › peer-review
  • PublishedFamily Alcanivoraceae.
    Golyshin, P., Golyshin, P. N., Harayama, S., Timmis, K. N., Yakimov, M. M. & Garrity, G. M. (ed.), 1 Jan 2005, Bergey’s Manual of Systematic Bacteriology, 2nd Edition, Volume 2. 2005 ed. Springer Verlag, p. 295-298
    Research output: Chapter in Book/Report/Conference proceeding › Chapter
  • PublishedMicrobial enzymes mined from the Urania deep-sea hypersaline anoxic basin.
    Ferrer, M., Golyshina, O. V., Chernikova, T. N., Khachane, A. N., Dos Santos, V. A., Yakimov, M. M., Timmis, K. N. & Golyshin, P. N., 1 Aug 2005, In: Chemistry and Biology. 12, 8, p. 895-904
    Research output: Contribution to journal › Article › peer-review
  • PublishedMining genomes and 'metagenomes' for novel catalysts.
    Golyshin, P., Ferrer, M., Martinez-Abarca, F. & Golyshin, P. N., 1 Dec 2005, In: Current Opinion in Biotechnology. 16, 6, p. 588-593
    Research output: Contribution to journal › Article › peer-review
  • PublishedNatural microbial diversity in superficial sediments of Milazzo Harbor (Sicily) and community successions during microcosm enrichment with various hydrocarbons.
    Yakimov, M. M., Denaro, R., Genovese, M., Cappello, S., D'Auria, G., Chernikova, T. N., Timmis, K. N., Golyshin, P. N. & Giuliano, L., 1 Sep 2005, In: Environmental Microbiology. 7, 9, p. 1426-1441
    Research output: Contribution to journal › Article › peer-review
  • PublishedNovel hydrolase diversity retrieved from a metagenome library of bovine rumen microflora.
    Ferrer, M., Golyshina, O. V., Chernikova, T. N., Khachane, A. N., Reyes-Duarte, D., Dos Santos, V. A., Strompl, C., Elborough, K., Jarvis, G., Neef, A., Yakimov, M. M., Timmis, K. N. & Golyshin, P. N., 1 Dec 2005, In: Environmental Microbiology. 7, 12, p. 1996-2010
    Research output: Contribution to journal › Article › peer-review
  • PublishedSequence and structure analysis of crytic plasmid pN30 from oil-oxidising strain Rhodococcus erythropolis 30.
    Golyshin, P., Ryabchenko, L. E., Novikov, A. D., Golyshin, P. N. & Yanenko, A. S., 1 Dec 2005, In: Russian Journal of Genetics. 41, 12, p. 1434-1436
    Research output: Contribution to journal › Article › peer-review
  • PublishedАнализ криптической плазмиды pN30 из нефтеразрушающего штамма Rhodococcus erythropolis 30
    Riabchenko, L. E., Novikov, A. D., Golyshin, P. N. & Ianenko, A. S., Dec 2005, In: Genetika. 41, 12, p. 1725-7 3 p.
    Research output: Contribution to journal › Article › peer-review

2004

  • PublishedCrude oil-induced structural shift of coastal bacterial communities of rod bay (Terra Nova Bay, Ross Sea, Antarctica) and characterization of cultured cold-adapted hydrocarbonoclastic bacteria.
    Yakimov, M. M., Gentile, G., Bruni, V., Cappello, S., D'Auria, G., Golyshin, P. N. & Giuliano, L., 1 Sep 2004, In: Fems Microbiology Ecology. 49, 3, p. 419-432
    Research output: Contribution to journal › Article › peer-review
  • PublishedExpression of a temperature-sensitive esterase in anovel chaperone-based Escherichia coli strain.
    Ferrer, M., Chernikova, T. N., Timmis, K. N. & Golyshin, P. N., 1 Aug 2004, In: Applied and Environmental Microbiology. 70, 8, p. 4499-4504
    Research output: Contribution to journal › Article › peer-review
  • PublishedFunctional consequences of single:double ring transitions in chaperonins: life in the cold.
    Ferrer, M., Lunsdorf, H., Chernikova, T. N., Yakimov, M., Timmis, K. N. & Golyshin, P. N., 1 Jul 2004, In: Molecular Microbiology. 53, 1, p. 167-182
    Research output: Contribution to journal › Article › peer-review
  • PublishedGenomic and mechanistic insights into the biodegradation of organic pollutants.
    Pieper, D. H., Dos Santos, V. A. & Golyshin, P. N., 1 Jun 2004, In: Current Opinion in Biotechnology. 15, 3, p. 215-224
    Research output: Contribution to journal › Article › peer-review
  • PublishedThalassolituus oleivorans gen. nov., sp nov., a novel marine bacterium that obligately utilizes hydrocarbons
    Yakimov, M. M., Giuliano, L., Denaro, R., Crisafi, E., Chernikova, T. N., Abraham, W. R., Luensdorf, H., Timmis, K. N. & Golyshin, P. N., 1 Jan 2004, In: International Journal of Systematic and Evolutionary Microbiology. 54, 1, p. 141-148
    Research output: Contribution to journal › Article › peer-review
  • PublishedThe use of biosurfactants in flotation: application for the removal of metal ions (vol 16, pg 1231, 2003)
    Zouboulis, A. I., Matis, K. A., Lazaridis, N. K. & Golyshin, P. N., 1 Jan 2004, In: Minerals Engineering. 17, 1, p. 105
    Research output: Contribution to journal › Article › peer-review

2003

  • PublishedChaperonins govern growth of Escherichia coli at low temperatures.
    Ferrer, M., Chernikova, T. N., Yakimov, M. M., Golyshin, P. N. & Timmis, K. N., 1 Nov 2003, In: Nature Biotechnology. 21, 11, p. 1266-1267
    Research output: Contribution to journal › Article › peer-review
  • PublishedGenome sequence completed of Alcanivorax borkumensis, a hydrocarbon-degrading bacterium that plays a global role in oil removal from marine systems.
    Golyshin, P. N., Dos Santos, V. A., Kaiser, O., Ferrer, M., Sabirova, Y. S., Lunsdorf, H., Chernikova, T. N., Golyshina, O. V., Yakimov, M. M., Puhler, A. & Timmis, K. N., 19 Dec 2003, In: Journal of Biotechnology. 106, 2-3, p. 215-220
    Research output: Contribution to journal › Article › peer-review
  • PublishedNew tools for elucidating the ecology of micro-organisms in aquatic environments.
    Golyshin, P., Fry, J. C., Giuliano, L. & Golyshin, P. N., 5 Dec 2003, In: Fems Microbiology Ecology. 46, 3, p. 231
    Research output: Contribution to journal › Article › peer-review
  • PublishedNovel maltotriose esters enhance biodegradation of Aroclor 1242 by Burkholderia cepacia LB400
    Ferrer, M., Golyshin, P. N. & Timmis, K. N., 1 Aug 2003, In: World Journal of Microbiology and Biotechnology. 19, 6, p. 637-643
    Research output: Contribution to journal › Article › peer-review
  • PublishedOleispira antarctica gen. nov., sp nov., a novel hydrocarbonoclastic marine bacterium isolated from Antarctic coastal sea water.
    Yakimov, M. M., Giuliano, L., Gentile, G., Crisafi, E., Chernikova, T. N., Abraham, W. R., Lunsdorf, H., Timmis, K. N. & Golyshin, P. N., 1 May 2003, In: International Journal of Systematic and Evolutionary Microbiology. 53, 3, p. 779-785
    Research output: Contribution to journal › Article › peer-review
  • PublishedThe use of biosurfactants in flotation: application for the removal of metal ions.
    Golyshin, P., Zouboulis, A. I., Matis, K. A., Lazaridis, N. K. & Golyshin, P. N., 1 Nov 2003, In: Minerals Engineering. 16, 11, p. 1231-1236
    Research output: Contribution to journal › Article › peer-review
  • PublishedThermoleophilum album and Thermoleophilum minutum are culturable representatives of group 2 of the Rubrobacteridae (Actinobacteria)
    Golyshin, P., Yakimov, M. M., Lunsdorf, H. & Golyshin, P. N., 1 Mar 2003, In: International Journal of Systematic and Evolutionary Microbiology. 53, 2, p. 377-380
    Research output: Contribution to journal › Article › peer-review

2002

  • PublishedMicrobial community of a saline mud volcano at San Biagio-Belpasso, Mt. Etna (Italy)
    Yakimov, M. M., Giuliano, L., Crisafi, E., Chernikova, T. N., Timmis, K. N. & Golyshin, P. N., 1 May 2002, In: Environmental Microbiology. 4, 5, p. 249-256
    Research output: Contribution to journal › Article › peer-review
  • PublishedOleiphilaceae fam. nov., to include Oleiphilus messinensis gen. nov., sp nov., a novel marine bacterium that obligately utilizes hydrocarbons.
    Golyshin, P. N., Chernikova, T. N., Abraham, W. R., Lunsdorf, H., Timmis, K. N. & Yakimov, M. M., 1 May 2002, In: International Journal of Systematic and Evolutionary Microbiology. 52, 3, p. 901-911
    Research output: Contribution to journal › Article › peer-review
  • PublishedPolychlorinated biphenyl-degrading microbial communities in soils and sediments.
    Golyshin, P., Abraham, W. R., Nogales, B., Golyshin, P. N., Pieper, D. H. & Timmis, K. N., 1 Jun 2002, In: Current Opinion in Microbiology. 5, 3, p. 246-253
    Research output: Contribution to journal › Article › peer-review
  • PublishedThe aerobic dechlorination activities of two bacterial species isolated from a refuse dumpsite in Nigeria.
    Olaniran, A. O., Okoh, A. I., Ajisebutu, S., Golyshin, P. N. & Babalola, G. O., 1 Mar 2002, In: International Microbiology. 5, 1, p. 21-24
    Research output: Contribution to journal › Article › peer-review

2001

  • PublishedAlcalilimnicola halodurans gen. nov., sp nov., an alkaliphilic, moderately halophilic and extremely halotolerant bacterium, isolated from sediments of soda-depositing Lake Natron, East Africa Rift Valley.
    Yakimov, M. M., Giuliano, L., Chernikova, T. N., Gentile, G., Abraham, W. R., Lunsdorf, H., Timmis, K. N. & Golyshin, P. N., 1 Nov 2001, In: International Journal of Systematic and Evolutionary Microbiology. 51, 6, p. 2133-2143
    Research output: Contribution to journal › Article › peer-review
  • PublishedUpstream-independent ribosomal RNA amplification analysis (URA): a new approach to characterizing the diversity of natural microbial communities.
    Golyshin, P., Yakimov, M. M., Giuliano, L., Timmis, K. N. & Golyshin, P. N., 1 Oct 2001, In: Environmental Microbiology. 3, 10, p. 662-666
    Research output: Contribution to journal › Article › peer-review

2000

  • PublishedFerroplasma acidiphilum gen. nov., sp nov., an acidophilic, autotrophic, ferrous-iron-oxidizing, cell-wall-lacking, mesophilic member of the Ferroplasmaceae fam. nov., comprising a distinct lineage of the Archaea.
    Golyshina, O. V., Pivovarova, T. A., Karavaiko, G. I., Kondratéva, T. F., Moore, E. R., Abraham, W. R., Lünsdorf, H., Timmis, K. N., Yakimov, M. M. & Golyshin, P. N., 1 May 2000, In: International Journal of Systematic and Evolutionary Microbiology. 50 , 3, p. 997-1006 10 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedRecombinant acylheptapeptide lichenysin: high level of production by Bacillus subtilis cells
    Yakimov, M. M., Giuliano, L., Timmis, K. N. & Golyshin, P. N., Apr 2000, In: Journal of Molecular Microbiology and Biotechnology. 2, 2, p. 217-24 8 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedRecombinant acylheptapeptide lichenysir: High level of production by Bacillus subtilis cells.
    Golyshin, P., Yakimov, M. M., Giuliano, L., Timmis, K. N. & Golyshin, P. N., 1 Apr 2000, In: Journal of Molecular Microbiology and Biotechnology. 2, 2, p. 217-224
    Research output: Contribution to journal › Article › peer-review

1999

  • PublishedCharacterization of antarctic hydrocarbon-degrading bacteria capable of producing bioemulsifiers
    Yakimov, M. M., Giuliano, L., Bruni, V., Scarfì, S. & Golyshin, P. N., Jul 1999, In: New microbiologica. 22, 3, p. 249-56 8 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedEffect of novel biosurfactants on biodegradation of polychlorinated biphenyls by pure and mixed bacterial cultures
    Golyshin, P. M., Fredrickson, H. L., Giuliano, L., Rothmel, R., Timmis, K. N. & Yakimov, M. M., Jul 1999, In: New microbiologica. 22, 3, p. 257-67 11 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedStructural characterization of lichenysin A components by fast atom bombardment tandem mass spectrometry
    Yakimov, M. M., Abraham, W. R., Meyer, H., Laura Giuliano & Golyshin, P. N., 18 May 1999, In: Biochimica et Biophysica Acta (BBA). 1438, 2, p. 273-80 8 p.
    Research output: Contribution to journal › Article › peer-review

1998

  • PublishedA putative lichenysin A synthetase operon in Bacillus licheniformis: initial characterization
    Yakimov, M. M., Kröger, A., Slepak, T. N., Giuliano, L., Timmis, K. N. & Golyshin, P. N., 20 Aug 1998, In: Biochimica et Biophysica Acta (BBA). 1399, 2-3, p. 141-53 13 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedAlcanivorax borkumensis gen. nov., sp. nov., a new, hydrocarbon-degrading and surfactant-producing marine bacterium
    Yakimov, M. M., Golyshin, P. N., Lang, S., Moore, E. R., Abraham, W. R., Lünsdorf, H. & Timmis, K. N., Apr 1998, In: International journal of systematic bacteriology. 48 Pt 2, p. 339-48 10 p.
    Research output: Contribution to journal › Article › peer-review

1997

  • PublishedComA-dependent transcriptional activation of lichenysin A synthetase promoter in Bacillus subtilis cells
    Yakimov, M. M. & Golyshin, P. N., 31 Dec 1997, In: Biotechnology progress. 13, 6, p. 757-61 5 p.
    Research output: Contribution to journal › Article › peer-review

1994

  • PublishedKlonirovanie gena vnekletochnoĭ RNKazy Bacillus circulans
    Fedorova, N. D., Shul'ga, A. A., Peredel'chuk, M. P., Kozharinova, L. V., Golyshin, P. N., Riabchenko, N. F. & Kirpichnikov, M. P., 1 Mar 1994, In: Molekuliarnaia biologiia. 28, 2, p. 468-71 4 p.
    Research output: Contribution to journal › Article › peer-review

1993

  • PublishedDve formy vnekletochnoĭ nizkomolekuliarnoĭ ribonukleazy Bacillus sp. BCF 247. Vydelenie i kharakteristika belka
    Dement'ev, A. A., Golyshin, P. N., Riabchenko, N. F., Pustobaev, V. N. & Shliapnikov, S. V., Aug 1993, In: Biokhimiia (Moscow, Russia). 58, 8, p. 1258-65 8 p.
    Research output: Contribution to journal › Article › peer-review
  • PublishedRol' Bacillus thuringiensis v prirodnykh biotsenozakh
    Golovko, A. E., Golyshin, P. N. & Riabchenko, N. F., 1 May 1993, In: Mikrobiologicheskii zhurnal. 55, 3, p. 104-10 7 p.
    Research output: Contribution to journal › Review article › peer-review
  • PublishedVnekletochnye shchelochnye ribonukleazy batsill vechnomerzlykh gruntov kolymskoĭ nizmennosti
    Golyshin, P. N., Kombarova, S. P., Riabchenko, N. F., Vorob'eva, E. A., Soina, V. S., Dement'ev, A. A. & Shliapnikov, S. V., 1 Nov 1993, In: Prikladnaia biokhimiia i mikrobiologiia. 29, 6, p. 844-50 7 p.
    Research output: Contribution to journal › Article › peer-review

1992

  • PublishedVnekletochnaia shchelochnaia ribonukleaza Bacillus thuringiensis var. subtoxicus
    Dement'ev, A. A., Riabchenko, N. F., Protasevich, I. I., Golyshin, P. N., Stepanov, A. I., Orlov, V. M., Pustovaev, V. N., Makarov, A. A., Moiseev, G. P. & Karpeĭskiĭ, M. I., 1 Nov 1992, In: Molekuliarnaia biologiia. 26, 6, p. 1338-49 12 p.
    Research output: Contribution to journal › Article › peer-review

Projects

  • Technologies of the Future for Low-Cost Enzymes for Environment-Friendly Products - FuturEnzyme (Grant No. 101000327)

    01/06/2021 – 30/06/2025 (Active)

  • Biologically Derived Polyesters and Polyamides - Production, Processing and Circular Life (BioP4Life)

    01/06/2020 – 30/06/2023 (Active)

  • Ocean microplastics

    14/01/2019 – 11/02/2024 (Active)

  • Centre for Environmental Biotechnology (Chemistry Element) [81280]

    01/11/2017 – 30/11/2022 (Finished)

  • 81280 - Centre for Environmental Biotechnology (SBS element)

    01/08/2017 – 07/03/2023 (Finished)

  • Industrial Applications of Marine Enzymes: Innovative screening and expression platforms to discover and use the functional protein diversity from the sea - INMARE (Grant no. 634486)

    01/04/2015 – 08/11/2021 (Finished)

    Description

    The INMARE consortium will unify multidisciplinary expertise and facilities, including advanced technologies to access and sample unique marine biodiversity hot-spots; state-of-the art technologies for construction of metagenomic libraries; innovative enzyme screening assays and platforms; cutting-edge sequence annotation pipelines and bioinformatics resources; high-end activity screening technology; bioanalytical and bioprocess engineering facilities and expertise, nanoparticle-biocatalysts; high-quality protein crystallization and structural analysis facilities and experts in IP management for biotechnology.

    The companies involved in the project are market leaders in enzyme production and biocatalysis to more efficiently deliver safer (pharmaceuticals, cheaper (agriculture) and biobased (biopolymers) products. In addition, all participating companies feel responsible and committed to render chemical processes greener.

    Further industrial partners involved, have impressive track records in natural products discovery for biomedical, especially anti-cancer (with the production of the first antitumor medicine from marine resources), environmental cleanup applications and public dissemination of science and in increasing the public awareness and interest in research.

    Links:

    • http://inmare.bangor.ac.uk/
  • Novel metagenomic biocatalyst collections for industrial biotechnology MetaCat

    01/03/2015 – 17/08/2018 (Finished)

  • 14 TSB-ACT-1R Biotechnology for Anti-Weeds (BAW)

    01/09/2014 – 11/03/2018 (Finished)

  • Characterising the impact of dissolved organic N, P, C

    01/04/2014 – 11/10/2019 (Finished)

  • SynbiCITE – Innovation and Knowledge Centre (IKC) in Synthetic Biology Centre

    01/10/2013 – 01/08/2019 (Finished)

  • Assessment of water quality indices of recreational surface waters in SA

    01/09/2013 – 30/09/2015 (Finished)

  • Mining novel enzymes from new thermophilic microorgs isolated from subsurface

    01/09/2013 – 30/09/2015 (Finished)

  • KILL SPILL

    01/01/2013 – 06/09/2021 (Finished)

  • Microbial Biodiversity, Bioinformatics and Biotechnology, MicroB3

    01/01/2012 – 01/08/2019 (Finished)

  • ULIXES - Unravel & exploit microbial diversity & ecology of Med Sea

    01/02/2011 – 09/09/2015 (Finished)

  • Molecular Approaches and Metagenomic Investigations of Optimizing Clean-up of PAH Contaminated Sites (MAGICPAH)

    01/04/2010 – 09/09/2015 (Finished)

  • Marine Metagenomics for new Biotechnological Applications: MAMBA (Management Activity)

    01/07/2009 – 01/08/2017 (Finished)

    Description

    MAMBA stands for “Marine Metagenomics for New Biotechnological Applications”, a collaborative project to mine for and use of new microbial activities, in particular for targeted production of fine chemicals, antioxidants and anti-cancer drugs.

    This Project builds up on the previous efforts of European Framework Programs and National research initiatives for exploiting the catalytic activities of marine microorganisms and microbial communities and to gain the new knowledge on the mechanisms of survival of living organisms in extreme environments.

    Links:

    • http://mamba.bangor.ac.uk/
  • Marine Metagenomics for new Biotechnological Applications: MAMBA (RTD Activity)

    01/07/2009 – 01/08/2019 (Finished)

    Description

    MAMBA stands for “Marine Metagenomics for New Biotechnological Applications”, a collaborative project to mine for and use of new microbial activities, in particular for targeted production of fine chemicals, antioxidants and anti-cancer drugs.

    This Project builds up on the previous efforts of European Framework Programs and National research initiatives for exploiting the catalytic activities of marine microorganisms and microbial communities and to gain the new knowledge on the mechanisms of survival of living organisms in extreme environments.

    Links:

    • http://mamba.bangor.ac.uk/

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