Modules for course C160 | BSC/MB
BSC Marine Biology
These were the modules for this course in the 2018–19 academic year.
- OSX-1000: Tutorial 1 (20) This module is designed to introduce a range of skills required for a marine science degree and to encourage wider reading in marine science. It involves directed reading and the practice in oral and written presentations. Regular tutorials (7 to 10 students per group) will be held throughout the year during which essay writing skills, oral presentation skills and abstracting information from the scientific literature will be discussed. The module will be assessed by two essay assignments, two oral presentations and an abstracting exercise to be done during the semester.or
OSC-1000: Tiwtorial 1 (20)
- ONS-1001: Environmental data & analysis (20) This module, unlike most others, concentrates on giving the student the basic literature searching, numerical and statistical skills required for pursuing the rest of their respective programmes of study. The course relies heavily on computer-based material and so the student also learns how to use and evaluate on-line information, as well as how to converse, discuss and learn via the Blackboard software package. The course starts with an introduction to the Information Literacy Cycle, issues of plagiarism and how to avoid it, and good practice for citing and referencing. Thereafter, the course concentrates on key aspects of any science degree. Lectures introduced include: distributions of populations within scientific data; ideas of probability; unit systems used within science; accuracy and precision; algebraic manipulation; graphing linear systems; and coping with non-linearity in natural systems. Included as part of this will be an introduction to the use of excel and powerpoint - two software packages which are almost essential in the life of an undergraduate student. Following these mainly numerically-related lectures, the module focuses on the scientific method, hypothesis setting and testing; these leading to the fundamental ideas concerning experimental design. These concepts then extend to discussing the importance of replication in scientific datasets. Finally, an introduction to specific statistical tests (parametric and non-parametric) is presented. Library searching and referencing Introduction to distributions within scientific data Ideas of probability Description of distributions Preamble to MS Excel On-line exercises Presentation with MS Powerpoint Unit systems used in science Accuracy & precision. How many decimal places? Introduction to algebraic manipulation Graphing of linear systems Coping with non-linearity in nature (logs etc.) The scientific method: hypothesis setting and testing Introduction to experimental design The importance of replication in scientific datasets Examples of statistical tests: parametric versus non-parametric Regression and correlation ANOVAor
ONC-1001: Dadansoddi Data Amgylcheddol (20)Mae'r modiwl hwn, yn wahanol i'r rhan fwyaf o fodiwlau eraill, yn canolbwyntio ar roi i'r myfyrwyr y sgiliau chwilio, rhifyddol ac ystadegol sylfaenol sydd eu hangen i ddilyn gweddill eu rhaglenni astudio. Mae'r cwrs yn dibynnu'n drwm ar ddeunydd cyfrifiadurol ac felly mae'r myfyriwr yn dysgu hefyd sut i ddefnyddio a gwerthuso gwybodaeth ar-lein yn ogystal â sut i sgwrsio, trafod a dysgu trwy gyfrwng pecyn meddalwedd Blackboard. Mae'r cwrs yn dechrau gyda chyflwyniad byr i system gyfrifiadurol y Brifysgol ( yn ystod yr Wythnos Groeso) ac yna'n symud ymlaen yn yr wythnos gyntaf i drafod rôl llenyddiaeth a thechnegau chwilio llenyddiaeth yn eu hastudiaethau yn y dyfodol. Ar ôl hynny, mae'r cwrs yn canolbwyntio ar agweddau allweddol unrhyw radd gwyddoniaeth. Mae'r darlithoedd a gyflwynir yn cynnwys: dosbarthiadau poblogaethau o fewn data gwyddonol; cysyniadau tebygolrwydd; systemau unedau a ddefnyddir mewn gwyddoniaeth; manwl gywirdeb; cyfrifiadau algebraig; rhyngberthnasau trigonometrig; gosod systemau llinol ar ffurf graff; ac ymdopi ag anflinoledd mewn systemau naturiol. Fel rhan o hyn ceir cyflwyniad i'r defnydd o Excel a Powerpoint - dau becyn meddalwedd sydd yn hanfodol bwysig i fywyd myfyriwr israddedig. Yn dilyn y darlithoedd hyn sydd yn ymwneud yn bennaf â rhifyddeg, mae'r modiwl yn canolbwyntio ar y dull gwyddonol, pennu a phrofi damcaniaethau; gan arwain at syniadau sylfaenol ynghylch cynllunio arbrofol. Yna mae'r cysyniadau hyn yn ymestyn i drafod pwysigrwydd dyblygu mewn setiau data gwyddonol. Yn olaf rhoddir cyflwyniad i brofion ystadegol penodol (parametrig ac anbarametrig). Llythrennedd gwybodaeth Gosod systemau llinol ar ffurf graff MS Excel Systemau unedau a ddefnyddir mewn gwyddoniaeth Manwl gywirdeb Cyflwyniad i ddosbarthiadau o fewn data gwyddonol Disgrifiad o ddosbarthiadau Cysyniadau tebygolrwydd Y dull gwyddonol: pennu a phrofi damcaniaethau Cyflwyniad gyda MS Powerpoint Cyflwyniad i gyfrifiadau algebraig Rhyngberthnasau trigonometrig Ymdopi ag aflinoledd ym myd natur; Cyflwyniad i ddylunio arbrofol Pwysigrwydd dyblygu mewn setiau data gwyddonol Enghreifftiau o brofion ystadegol; parametrig vs amharametrig Atchweliad a chydberthyniad Cyfraddau newid: gwahaniaethu Cyflwyniad i ddadansoddiad amlamrywedd
- BNS-1002: Organismal Diversity (20) All major groups of living organisms will be reviewed, from viruses, bacteria, protists, fungi and higher plants to invertebrate and vertebrate animals. General taxonomy, body form, physiology and life history will be studied to give an appreciation of the multiple aspects of biodiversity.
- OSX-1002: Marine Biology Practical 1 (20) Size, scale and biological drawing. Microscopy Keying out invertebrates and construction of a taxonomic key Sandy shore field trip to Traeth Melynog, salt marsh and identification of intertidal soft sediment benthos Macro-algae Benthos and Fish diversity Plankton Rocky shore field trip and survey of intertidal organisms
- OSX-1005: Introducing the Oceans (20) Provide a conceptual model of the physical systems of the oceans. Introduce the basic dynamical balances that govern ocean circulation. Demonstrate the links between ocean circulation and climate. Examine the influence of biological activity and ocean circulation on ocean chemistry. Understand the elements are continuously recycled in the oceans. Gain experience and skills in laboratory techniques relevant to an understanding of ocean chemistry. Gain experience and skills in laboratory techniques relevant to the flow of water, waves and density currents and basic dynamics.
- OSX-1000: Tutorial 1
OSC-1000: Tiwtorial 1
- ONS-1001: Environmental data & analysis
ONC-1001: Dadansoddi Data Amgylcheddol
- OSX-1002: Marine Biology Practical 1
- DNS-1003: Ecology & Evolution (20)
- OSX-1005: Introducing the Oceans Provide a conceptual model of the physical systems of the oceans. Introduce the basic dynamical balances that govern ocean circulation. Demonstrate the links between ocean circulation and climate. Examine the influence of biological activity and ocean circulation on ocean chemistry. Understand the elements are continuously recycled in the oceans. Gain experience and skills in laboratory techniques relevant to an understanding of ocean chemistry. Gain experience and skills in laboratory techniques relevant to the flow of water, waves and density currents and basic dynamics.
- OSX-2003: Marine Biology Practical II (20) Invertebrate feeding strategies I (bivalves, gastropods) Invertebrate feeding strategies II (polychaetes) Crustacean morphology. Shore crab Carcinus maenas Diversity of marine invertebrates associated with Laminaria holdfasts and fronds Echinoderm dissection, movement and feeding mechanisms Fishing and benthic surveys Fish meristics and otolith removal Otolith reading and fish age determination Dogfish dissection Parsites in cockles Hydrobia movement experiment Rocky shore community structure over a wave exposure gradient (feld trip)
- OSX-2007: Ship-based field course (20) This module provides experience of multidisciplinary fieldwork at sea. A wide range of oceanographic and geophysical instrumentation is introduced including instruments for measuring salinity, temperature, currents, chlorophyll, suspended and sea bed sediments. These include CTD, optical instruments (transmissometer, fluorometer), geoacoustic instruments (Side scan sonar, Sub-bottom profiler), and instruments for measuring current (Acoustic Doppler Current Profiler). In addition sampling of plankton, suspended and seabed sediments will be covered. Students spend one full day at sea on the Prince Madog collecting data using on-board instrumentation and collecting samples from the water column and sea bed. These are combined with data collected by students on other days (at least 9 in total, depending on numbers taking module) to produce an extensive data base. This is used to produce a data analysis report, and research report/paper the topic of which can be tailored to suit an individual student's interests.
- OSX-2009: Marine Ecology (20) Topics covered will include: rocky shore ecology, keystone species, physical and biological factors, zonation, disturbance, succession, macro-algal production. Soft sediment ecology, saltmarsh, seagrasses, mangal, tropical and temperate soft sediment shores. Sub-tidal hard substrate ecology, temperate reefs, physical and biological factors, community structure, exposure. Coral reef ecology, types and formation, algal symbiosis, biodiversity and productivity, community structure, development and change, processes leading to stable communities.
- OSX-2000: Communicating Science (20) Topics covered will be very wide ranging across Ocean Sciences. Individual staff each provide an area of interest. Students choose a general area of interest and are, where possible, matched to the tutorial group of the appropriate member of staff. Tutorial groups will be of approximately equal size.or
OSC-2000: Cyfathrebu Gwyddoniaeth (20)
- OSX-2002: Marine Physiology & Behaviour (20) The module will examine the physiological and behavioural ecology of marine organisms. The physiology of marine algae and marine animals and the effects of chemical and physical variables (such as temperature, salinity, light and pressure) on physiology will be reviewed. A range of behaviours (e.g. social interactions, reproductive behaviour, feeding behaviour, migration) that enable animals to adapt to their environment will be introduced and discussed. The physiological and behavioural adaptations of animals to living in intertidal habitats will be reviewed.
- OSX-2003: Marine Biology Practical II
- OSX-2007: Ship-based field course This module provides experience of multidisciplinary fieldwork at sea. A wide range of oceanographic and geophysical instrumentation is introduced including instruments for measuring salinity, temperature, currents, chlorophyll, suspended and sea bed sediments. These include CTD, optical instruments (transmissometer, fluorometer), geoacoustic instruments (Side scan sonar, Sub-bottom profiler), and instruments for measuring current (Acoustic Doppler Current Profiler). In addition sampling of plankton, suspended and seabed sediments will be covered. Students spend one full day at sea on the Prince Madog collecting data using on-board instrumentation and collecting samples from the water column and sea bed. These are combined with data collected by students on other days (at least 9 in total, depending on numbers taking module) to produce an extensive data base. This is used to produce a data analysis report, and research report/paper the topic of which can be tailored to suit an individual student's interests.
20 credits from:
- OSX-2004: Estuary & Shelf Sea Processes (20) (Semester 1) This course introduces the fundamental processes occurring in shelf seas and estuaries and examines the relationship between physics, chemistry and sediments. Topics covered include: air-sea interaction (heat, gases etc) water column structure: seasonal stratification and mixing inputs of fresh water at the coast and estuarine circulation movement of sediments in shelf seas and estuaries nutrients and chemical origin, cycling and fate in shelf sea palaeo-oceanography of shelf seas The course is taught through lectures, laboratory and computer practicals and a field course.
- OSX-2006: Tides, Waves and Sampling (20) (Semester 1) Chemical oceanography: The methods associated with measuring primary production and the collection of dissolved and particulate constituents will be presented along with the advantages and disadvantages of each particular methodology. Physical oceanography: Topics relating to the tides will be the speed of shallow water waves, the effect of wave reflection and the Earth's rotation, amphidromic systems, tidal friction, and an explanation of the tides around the UK. Topics related to surface waves will be wave generation by wind/storms, the propagation of wave energy in deep and shallow water, wave transformation and refraction in coastal waters, wave diffraction, wave breaking and the classification of breaking waves, breakpoint bars on beaches.
- OSX-3011: Extreme Marine Habitats (20) This module will consider the environmental and physiological factors that determine the distribution and abundance of marine organisms in a range of extreme environments. The environments covered are: hydrothermal vents, deep-sea habitats, coral reefs, sea ice and cold hydrocarbon seeps. How the organisms have managed to adapt physiologically within these environments will be discussed and students will be shown the similarities and differences between these ecosystems and those in less extreme environments
- OSX-3013: Intertidal Field Project (10) This module aims to provide a practical, hands-on experience of conducting a small scale field project in small groups (3-4 students) on intertidal rocky shores to test a specific hypothesis. Students will be given the basic tools to conduct the project, including the concept of hypothesis testing, and skills in conducting appropriate graphical, statistical analysis and report writing. Workshops will be used to develop initial ideas followed by a reconnaissance field trip to refine these ideas. A specific workshop with support from staff and demonstrators will refine hypotheses to be tested and establish a detailed methodology. This methodology will then be implemented in a field trip where data will be collected. A final workshop will provide an opportunity to begin organising and analysing data under supervision. Students will then write up project reports individually.
- OSX-3000: Dissertation (20) The students' initial choice of dissertation topic will be organised prior to the start of the module and the topics covered will be very wide ranging across the whole spectrum of Ocean Sciences. An introductory lecture will outline the academic purpose and the organisational structure of the Module and will remind students of literature searching methods, and strategies for collation, review and analysis of data. Following this, students will work independently but with the support of a supervisor who will generally be cognisant of, and may often be an expert in, the area of the students' dissertation topic. There will be three formal tutorials during the semester and a second general lecture that will offer advice on oral presentations. Each student will give a short oral presentation to a large audience in a Conference-style format and will be required to be part of that audience for other students. A final substantial (approximately 10,000 words, 25 pages) dissertation will be submitted electronically through TURNITIN (plagiarism software) and as two soft-bound copies for assessment.
- OSX-3002: Marine Ecosystems & Processes (20) The module takes as an over-arching theme the concepts of ecosystem functioning and ecosystem services. It commences with 5 introductory lectures that illustrate the factors that underpin ecosystem functioning, as well as factors that can cause ecosystems to change. The key corner-stones that underpin ecosystem processes are detailed. A particular focus is made on exploring the role of biodiversity in maintaining ecosystem functions and services. Drivers of ecosystem change and resistance to change are considered, in the contexts of ecosystem resilience, system vulnerability and ecosystem regime-shifts. The role of biodiversity in maintaining resilience in marine systems is examined. Factors that determine secondary production of systems are considered, with particular focus on zooplankton, marine benthos and fish. The practical shapes of ecosystem functioning, services, resilience and vulnerability are then illustrated by a series of lectures that consider the biology, ecology and conservational status of key ecosystems in detail. Systems for which particular focus is made are: estuaries, mangroves, coastal shelf seas, pelagic systems, deep sea benthos and deep sea mounts. The module also has emphasis on reviewing the influences of some of the most important current drivers of change in marine ecosystems (‘Global Impacts’). Six dedicated lectures examine the effects of invasive species, ocean acidification, climate change, benthic exploration and fisheries disturbance on the functioning of marine ecosystems. The course includes a marked course-work component. A three-session practical focuses on examining the value that society is willing to place on conserving marine biodiversity. In the first session, students are asked to design a Contingent Valuation Questionnaire which to test for society’s Willingness to Pay for biodiversity conservation. Students are then asked to collect their data, by taking their questionnaire to the wider student population within Bangor University. In the second session, the results are analysed and a group presentation is drafted. In the third sessions, groups give their presentations. Students individually produce a poster for assessment. Marks are given for the group presentation and for the student poster.
20 credits from:
- OSX-3020: Sharks and their Relatives (20) (Semester 1) Evolutionary history and taxonomy of elasmobranchs The differences between sharks, skates and rays Early life histories Migrations – links to oceanographic patterns and mechanisms Technologies relating to tagging and tracking Population ecology What makes sharks successful and unique? Elasmobranch physiology Anthropogenic influences and conservations issues
- OSX-3023: Marine Mammal Science (20) (Semester 1)
10 credits from:
- OSX-3014: Larval Ecology (10) (Semester 1) This module will consider the environmental factors that determine (a) the distribution and abundance of a diversity of larval forms (b) growth and survival of organisms during the early life. Topics covered are: (1) Types of larvae and modes of development (2) Patterns of distribution of larval forms according to latitude, temperature and salinity (3) Ecological factors affecting spawning and larval release (4) Maternal effects and developmental variability (5) Pelagic larvae: physiological adaptations to larval life (6) Larval transport: the combined effect of behaviour and hydrodynamics (7) Processes affecting metamorphosis and settlement (benthic species) (8) Recruitment-I: definition and the match-mismatch hypothesis (9) Recruitment-II: the importance of larval supply, settlement and (10) Recruitment-III: post-settlement processes (11) Links between climate change and population dynamics mediated by larvae (12) Case study- I: the crab Neohelice granulata: maternal and carry over effects (13) Case study -II: the crab Carcinus maenas: larval transport, settlement and cannibalism (14) Case study -III: the barnacle Semibalanus balanoides (15) Synthesis
- OSX-3015: Overseas Field Course VIMS USA (10) (Semester 1) This field course will take place during the summer in the Virginia Institute of Marine Science (VIMS), USA. The module is designed to educate students in the field and to allow them to reinforce and demonstrate practically information that they have gained during their 1st and 2nd year lecture courses. The field excursions will introduce students to the ways in which various biological and physical environmental factors and their interactions can control community organisation and population structure in a selection of benthic systems in a sub-tropical estuarine setting overseas. Students will have the opportunity to sample and study saltmarsh communities, pelagic fisheries, intertidal and subtidal sediments using shore and boat based techniques.
20 credits from:
- OSX-3001: Marine Conservation & Exploit. (20) (Semester 2) The course will address methods of natural resource assessment, and techniques and tools for protection and management of living marine resource exploitation. Marine biological diversity will be defined, and impacts and threats assessed, identifying the need to protect species, ecological processes and critical habitats. The limits of environmental degradation and rehabilitation will be explored. Conservation methods developed for terrestrial diversity do not extend into the marine environment, and differences in approach will be considered. The effectiveness of tools such as zoning, legislation, environmental impact assessment, and Marine Protected Areas will be assessed. Sustainable development and integrated coastal zone management will be introduced, and case studies from around the world will be used to illustrate successes and failures of biological conservation. The course will deal with the over-exploitation of marine biological resources with a global overview and case studies of fisheries at the single species and ecosystem levels. The historical development of fisheries exploitation will be linked to technological advances made over the last 80 000 years. Approaches to management of fisheries will be evaluated. Aquaculture will be introduced as an alternative means of seafood production, criteria for selection of species will be considered, including biological characteristics, growth, reproduction, larval culture, yields and economics. Principles and culture practices for the major farmed groups will be reviewed and a range of species and characteristics of production systems from extensive to highly intensive will be compared, together with alternative approaches to increasing production such as stock enhancement. Environmental impacts, constraints on development and sustainability of aquaculture will be discussed
- OSX-3019: Fish Biology and Ecology (20) (Semester 2) This module will provide a detailed introduction to the evolution, taxonomy and diversity of teleost fishes, a summary of the variation in life cycles, population dynamics and ecology and a review of the anthropogenic threats facing this diverse and widely distributed vertebrate group. The course will contain the following topics: • The evolution and diversity of teleost fishes will be reviewed and placed within the broader context of fish evolution. • The evolutionary ecology of fishes will be described including the use of fish species as models for speciation. • The adaptive radiation and zoogeography of teleosts will be reviewed covering freshwater and marine distributions as well as the distribution and adaptations to more extreme environments such as intertidal, polar, deep sea, cave and arid habitats. • The lifecycles and population dynamics of teleost fishes will be reviewed. Particular focus will be place on the larval phase as the critical phase in the life cycle for most teleost fishes and the variability in life cycles and life history strategies observed amongst teleost fishes will be reviewed. Fish population dynamics will be reviewed including summaries of how patterns of population structure, growth, mortality and maturity are described. The models used to describe the dynamics of fish populations (including fisheries management models) will be described. • Community ecology of freshwater and marine fishes will be described including feeding guilds and trophic dynamics. • The behavioural ecology of teleost fishes will be summarised to provide a summary of how fishes interact with each other and with their environment. • The conservation ecology of teleost fishes will be reviewed with particular focus on extinction and biodiversity threats and the approaches adopted to conserve and restore threatened fishes. • The anthropogenic impacts on teleost fishes will be summarised including exploitation impacts (ecosystem shifts and fisheries-induced evolution) and environmental impacts (pollutants, invasive fish species, habitat destruction and climate change)